Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_0116
Experiment: MoYLS4 with Carbenicillin 0.0468 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Carbenicillin 0.0468 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 126,089 | - | DvMF_0115 | 0.48 | -0.8 | |
| 126,463 | - | DvMF_0115 | 0.88 | -0.3 | |
| 126,481 | + | DvMF_0115 | 0.90 | -0.2 | |
| 126,514 | + | -0.0 | |||
| 126,999 | + | -1.0 | |||
| 127,234 | - | DvMF_0116 | 0.59 | -0.9 | |
| 127,252 | - | DvMF_0116 | 0.63 | -0.6 | |
| 127,287 | - | DvMF_0116 | 0.71 | -0.7 | |
| 127,311 | + | DvMF_0116 | 0.77 | -0.8 | |
| 127,314 | - | DvMF_0116 | 0.78 | -0.8 | |
| 127,457 | + | -0.3 | |||
| 127,488 | - | +0.0 | |||
| 127,597 | + | -0.2 | |||
| 127,719 | - | +1.3 | |||
| 127,719 | - | +0.2 | |||
| 127,778 | + | DvMF_0117 | 0.15 | -0.2 | |
| 128,111 | + | DvMF_0117 | 0.55 | -0.2 | |
| 128,303 | - | DvMF_0117 | 0.78 | -0.6 | |
| 128,310 | + | DvMF_0117 | 0.79 | +0.1 | |
| 128,390 | + | DvMF_0117 | 0.89 | -0.8 |
Or see this region's nucleotide sequence