Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3879

Experiment: m.b. nitrate 300 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. nitrate 300 mM
102,095	+				-1.5
102,096	+				+0.5
102,096	+				-0.0
102,096	+				-1.5
102,096	+				+0.5
102,096	+				+1.6
102,096	+				-0.5
102,121	+				-1.0
102,121	+				-0.7
102,121	+				+0.1
102,121	-				-0.2
102,149	+				+0.5
102,151	+				+1.0
102,151	+				-0.6
102,157	+				-1.1
102,165	-				-0.4
102,167	+				+3.8
102,167	+				+0.7
102,167	+				-0.1
102,167	+				-0.8
102,167	+				-0.6
102,167	+				+0.4
102,167	+				+0.4
102,167	+				-0.4
102,167	+				-2.7
102,167	+				-0.7
102,167	+				+2.0
102,167	+				-0.5
102,167	+				+0.5
102,167	+				+0.5
102,167	+				+1.5
102,167	+				+0.2
102,167	+				-0.3
102,167	+				+0.4
102,167	+				-0.2
102,167	+				+0.2
102,167	+				+0.2
102,167	+				-0.8
102,167	+				+0.5
102,167	+				-0.7
102,167	+				-1.2
102,167	+				+4.0
102,169	+				+0.1
102,173	-				+0.5
102,175	-				-0.6
102,175	-				-0.3
102,175	-				-2.1
102,175	-				-0.1
102,175	-				+2.3
102,175	-				-0.5
102,175	-				-0.7
102,175	-				-0.1
102,175	-				+0.1
102,175	-				-0.9
102,175	-				-0.8
102,175	-				+0.0
102,175	-				-0.3
102,175	-				+4.2
102,175	-				+2.0
102,175	-				+0.2
102,175	-				+0.3
102,175	-				+0.1
102,175	-				-0.5
102,175	-				-2.0
102,180	+				-1.8
102,180	+				-0.7
102,180	+				-1.7
102,180	+				-0.3
102,180	+				+3.8
102,180	+				-0.1
102,180	+				-2.7
102,180	+				-2.1
102,180	+				-0.4
102,180	+				-0.1
102,182	+				-0.3
102,185	+				-1.7
102,185	+				-1.0
102,185	+				+0.8
102,185	+				-2.5
102,185	+				-1.5
102,185	+				+0.2
102,185	+				-1.5
102,188	-				-1.0
102,188	-				-1.5
102,188	-				+1.2
102,190	+				-0.5
102,190	+				-0.7
102,190	+				-0.0
102,193	-				+0.9
102,193	-				-0.8
102,198	-				+0.0
102,198	-				-1.7
102,198	-				+1.8
102,198	-				-0.4
102,235	+				+2.7
102,243	-				-3.9
102,247	-				-0.3
102,247	-				-1.4
102,247	-				-3.5
102,249	+				-0.6
102,249	+				+0.3
102,249	+				-2.4
102,249	+				-0.2
102,249	+				+0.3
102,249	+				-1.7
102,257	+				-0.3
102,257	-				+3.0
102,257	-				+0.5
102,258	-				+0.1
102,265	-				-0.7
102,280	-				-0.8
102,280	-				-0.2
102,287	-				+3.9
102,305	-				-1.6
102,305	-				-0.9
102,305	-				+0.5
102,305	-				+0.2
102,316	+				-2.1
102,323	-				-0.1
102,326	-				-1.2
102,340	+				-1.5
102,347	-				-0.1
102,348	-				-0.1
102,361	+				-0.3
102,392	+		Dshi_3879	0.11	+0.7
102,394	+		Dshi_3879	0.11	+0.8
102,394	+		Dshi_3879	0.11	+1.3
102,400	-		Dshi_3879	0.12	-1.2
102,400	-		Dshi_3879	0.12	-0.8
102,400	-		Dshi_3879	0.12	+0.8
102,400	-		Dshi_3879	0.12	-0.7
102,402	+		Dshi_3879	0.12	-0.6
102,410	-		Dshi_3879	0.13	-0.5
102,467	+		Dshi_3879	0.20	-0.2
102,493	-		Dshi_3879	0.23	-1.0
102,520	+		Dshi_3879	0.26	+0.4
102,540	+		Dshi_3879	0.29	-0.1
102,550	+		Dshi_3879	0.30	-0.5
102,556	+		Dshi_3879	0.31	+1.0
102,568	+		Dshi_3879	0.32	-0.1
102,583	+		Dshi_3879	0.34	-0.5
102,602	+		Dshi_3879	0.37	-0.4
102,602	+		Dshi_3879	0.37	-0.3
102,608	-		Dshi_3879	0.37	-0.2
102,610	-		Dshi_3879	0.38	+0.2
102,667	+		Dshi_3879	0.45	+0.2
102,667	+		Dshi_3879	0.45	-0.9
102,667	+		Dshi_3879	0.45	-1.1
102,667	+		Dshi_3879	0.45	+0.7
102,667	+		Dshi_3879	0.45	-0.3
102,667	+		Dshi_3879	0.45	-0.6
102,667	+		Dshi_3879	0.45	-2.1
102,669	+		Dshi_3879	0.45	-0.1
102,669	+		Dshi_3879	0.45	+0.7
102,675	-		Dshi_3879	0.46	-0.7
102,675	-		Dshi_3879	0.46	+0.9
102,675	-		Dshi_3879	0.46	+0.1
102,675	-		Dshi_3879	0.46	-0.3
102,677	-		Dshi_3879	0.46	-1.1
102,677	-		Dshi_3879	0.46	+1.6
102,680	+		Dshi_3879	0.46	+1.6
102,707	+		Dshi_3879	0.49	-2.1
102,707	+		Dshi_3879	0.49	-0.5
102,708	+		Dshi_3879	0.50	+0.1
102,708	+		Dshi_3879	0.50	+0.5
102,708	+		Dshi_3879	0.50	-1.0
102,716	-		Dshi_3879	0.51	-1.4
102,716	-		Dshi_3879	0.51	+0.1
102,716	-		Dshi_3879	0.51	+0.5
102,724	+		Dshi_3879	0.52	+0.2
102,724	+		Dshi_3879	0.52	-0.5
102,729	+		Dshi_3879	0.52	+1.2
102,729	+		Dshi_3879	0.52	+0.4
102,729	+		Dshi_3879	0.52	-1.1
102,729	+		Dshi_3879	0.52	-0.3
102,729	+		Dshi_3879	0.52	+1.0
102,729	+		Dshi_3879	0.52	+0.2
102,729	+		Dshi_3879	0.52	-0.6
102,729	+		Dshi_3879	0.52	-1.1
102,729	+		Dshi_3879	0.52	+3.0
102,729	+		Dshi_3879	0.52	-1.5
102,729	+		Dshi_3879	0.52	+0.2
102,731	-		Dshi_3879	0.52	-0.9
102,731	-		Dshi_3879	0.52	-0.5
102,737	-		Dshi_3879	0.53	-0.5
102,737	-		Dshi_3879	0.53	-0.1
102,737	-		Dshi_3879	0.53	+0.5
102,737	-		Dshi_3879	0.53	+2.5
102,737	-		Dshi_3879	0.53	+2.0
102,746	+		Dshi_3879	0.54	-0.5
102,754	-		Dshi_3879	0.55	-0.4
102,760	+		Dshi_3879	0.56	-0.1
102,843	-		Dshi_3879	0.66	+0.5
102,845	+		Dshi_3879	0.66	-2.5
102,850	+		Dshi_3879	0.67	-3.9
102,850	+		Dshi_3879	0.67	+0.0
102,850	+		Dshi_3879	0.67	+0.1
102,850	+		Dshi_3879	0.67	-3.0
102,850	+		Dshi_3879	0.67	-0.5
102,850	+		Dshi_3879	0.67	-0.5
102,851	-		Dshi_3879	0.67	-0.6
102,856	-		Dshi_3879	0.68	-0.5
102,858	-		Dshi_3879	0.68	-1.6
102,858	-		Dshi_3879	0.68	+0.8
102,858	-		Dshi_3879	0.68	+0.6
102,858	-		Dshi_3879	0.68	-1.0
102,858	-		Dshi_3879	0.68	+0.3
102,858	-		Dshi_3879	0.68	+2.0
102,858	-		Dshi_3879	0.68	-0.9
102,858	-		Dshi_3879	0.68	+0.1
102,863	-		Dshi_3879	0.69	-0.6
102,863	-		Dshi_3879	0.69	-0.5
102,865	+		Dshi_3879	0.69	+0.9
102,868	-		Dshi_3879	0.69	+1.5
102,872	+		Dshi_3879	0.70	+1.9
102,880	-		Dshi_3879	0.71	+1.0
102,880	-		Dshi_3879	0.71	+1.8
102,880	-		Dshi_3879	0.71	+2.2
102,885	+		Dshi_3879	0.71	+0.8
102,892	-		Dshi_3879	0.72	-1.0
102,893	-		Dshi_3879	0.72	-0.8
102,893	-		Dshi_3879	0.72	+2.0
102,893	-		Dshi_3879	0.72	+1.5
102,893	-		Dshi_3879	0.72	+1.0
102,894	-		Dshi_3879	0.72	-1.1
102,895	+		Dshi_3879	0.73	+0.0
102,895	+		Dshi_3879	0.73	+0.7
102,895	+		Dshi_3879	0.73	+1.3
102,895	+		Dshi_3879	0.73	-0.1
102,903	-		Dshi_3879	0.74	+0.7
102,903	-		Dshi_3879	0.74	+3.5
102,903	-		Dshi_3879	0.74	-0.2
102,903	-		Dshi_3879	0.74	-2.5
102,943	+		Dshi_3879	0.78	+0.6
102,947	-		Dshi_3879	0.79	+0.1
102,951	-		Dshi_3879	0.79	+0.5
102,951	-		Dshi_3879	0.79	+3.5
102,951	-		Dshi_3879	0.79	-0.2
102,951	-		Dshi_3879	0.79	+0.5
102,951	-		Dshi_3879	0.79	-0.6
102,951	-		Dshi_3879	0.79	+1.0
102,951	-		Dshi_3879	0.79	+2.0
102,953	+		Dshi_3879	0.80	+0.9
102,958	-		Dshi_3879	0.80	-1.1
102,977	+		Dshi_3879	0.83	+0.5
102,977	+		Dshi_3879	0.83	+1.8
102,977	+		Dshi_3879	0.83	-0.7
102,978	+		Dshi_3879	0.83	-0.0
102,988	+		Dshi_3879	0.84	+0.2
102,996	-		Dshi_3879	0.85	+2.9
102,996	-		Dshi_3879	0.85	+0.1
102,997	-		Dshi_3879	0.85	-0.0
103,004	-		Dshi_3879	0.86	+3.0
103,025	+		Dshi_3879	0.89	-0.6
103,036	+				+0.5
103,047	+				-1.7
103,047	+				+0.4
103,055	-				-0.1
103,057	+				+1.5
103,057	+				-0.9
103,065	-				+0.2
103,065	-				+0.5
103,065	-				-2.5
103,065	-				+0.1
103,069	+				+1.8
103,069	+				+0.8
103,071	+				-0.2
103,071	+				-2.7
103,077	-				+0.4
103,077	-				-1.7
103,078	+				+2.5
103,088	+				+1.5
103,089	+				-1.2
103,097	+				-0.8
103,102	+				-1.0
103,104	+				-1.1
103,104	+				+0.7
103,104	+				+0.5
103,104	+				-0.6
103,104	+				+0.4
103,104	+				-0.5
103,104	+				-0.8
103,104	+				+0.6
103,104	+				-1.3
103,104	+				+0.0
103,104	+				+0.3
103,104	+				-0.5
103,104	+				-2.7
103,104	+				-0.4
103,104	+				-0.2
103,104	+				+1.1
103,104	+				-1.1
103,107	+				+1.0
103,112	-				+0.6
103,112	-				+1.1
103,112	-				+0.5
103,112	-				-1.5
103,112	-				-0.3
103,112	-				-0.1
103,112	-				-0.9
103,112	-				+0.0
103,112	-				-1.5
103,112	-				+0.8
103,112	-				+0.2
103,112	-				+0.5
103,112	-				+0.2
103,112	-				-1.0
103,112	-				-0.5
103,112	-				-0.2
103,114	+				-0.1
103,121	+				-0.5
103,124	-				-1.9
103,151	+				-1.2
103,159	-				-0.9
103,159	-				-0.4
103,170	+				+1.5
103,171	-				-0.5
103,171	-				-0.2
103,175	+				+0.9
103,180	+				+2.0
103,183	-				-0.7
103,186	+				+2.5
103,186	+				-0.4
103,186	+				+0.1
103,186	+				+1.4
103,188	+				-1.1
103,194	-				+0.1
103,194	-				+2.5
103,194	-				-1.5
103,195	-				+2.0
103,195	-				+0.5
103,196	+				-0.4
103,204	-				-0.7
103,204	-				-0.1
103,207	+				-1.0
103,207	+				+0.1
103,208	+				+0.7
103,208	+				+3.3
103,209	-				-1.1
103,218	+				-0.1
103,219	+				+1.7
103,223	+				-1.6
103,223	-				-0.8
103,226	-				+3.6
103,236	-				-2.0
103,237	-				+3.6
103,240	+				-0.9
103,242	+				-0.2
103,242	+				+0.7
103,242	+				+0.1
103,242	+				-0.3
103,242	+				-0.4
103,242	+				-2.1
103,242	+				+0.5
103,242	+				+0.2
103,242	+				-0.0
103,242	+				-1.0
103,248	-				+0.8
103,249	+				-0.5
103,249	+				+2.5
103,250	-				-0.5
103,250	-				+1.3
103,250	-				-1.1
103,250	-				-0.4
103,250	-				-1.0
103,250	-				+2.0
103,250	-				+0.6
103,250	-				-0.2
103,250	-				-1.1
103,250	-				+3.4
103,250	-				-0.9
103,250	-				+1.4
103,250	-				-1.0
103,250	-				-1.8
103,255	-				+2.8
103,257	-				-0.3
103,257	-				+1.0
103,275	+				+0.3
103,275	+				-1.2
103,281	+				-0.5
103,281	+				+1.1
103,281	+				+0.7
103,281	+				+0.2
103,281	+				+1.5
103,283	-				+0.4
103,283	-				-0.5
103,288	-				+0.8
103,288	-				+0.5
103,288	-				-0.9
103,289	-				-0.4
103,289	-				+0.8
103,291	+				-0.8
103,296	+				+0.5
103,296	+				-0.4
103,299	+				-0.6
103,299	-				-1.2
103,299	-				+2.0
103,299	-				-1.3
103,299	-				-0.9
103,307	-				-0.9
103,307	-				-1.5
103,337	-				-1.1
103,375	+				+0.7
103,383	-				+0.6
103,383	-				+0.9
103,383	-				+0.6
103,383	-				+1.3
103,383	-				-0.8
103,399	+				-0.3
103,406	+				+2.9
103,406	-				+0.1
103,407	-				+1.5
103,413	+				+0.5
103,413	+				+2.3
103,413	+				+0.5
103,413	+				+0.0
103,413	+				+0.1
103,418	+				+0.9
103,418	+				-1.2
103,418	+				+0.3
103,418	+				-2.1
103,418	+				+0.2
103,418	+				+1.2
103,418	+				+2.8
103,421	-				-0.1
103,421	-				-0.7
103,421	-				-0.0
103,421	-				-0.8
103,423	+				+0.2
103,423	+				+0.5
103,426	-				+0.6
103,426	-				+0.8
103,426	-				+0.0
103,429	+				-1.7
103,439	-				+0.8
103,442	-				+2.2
103,449	-				-0.5
103,477	-		Dshi_3880	0.14	+1.4
103,484	+		Dshi_3880	0.16	+2.6
103,484	+		Dshi_3880	0.16	-0.7
103,487	-		Dshi_3880	0.16	-0.0
103,488	-		Dshi_3880	0.17	+0.1
103,492	-		Dshi_3880	0.17	-1.8
103,492	-		Dshi_3880	0.17	-0.0
103,503	-		Dshi_3880	0.19	-0.3
103,513	-		Dshi_3880	0.21	+1.2
103,519	+		Dshi_3880	0.22	-0.8
103,519	+		Dshi_3880	0.22	+0.5
103,520	+		Dshi_3880	0.23	+0.5
103,527	+		Dshi_3880	0.24	+1.1
103,527	-		Dshi_3880	0.24	-0.8
103,527	-		Dshi_3880	0.24	-1.0
103,535	-		Dshi_3880	0.26	+0.1
103,541	-		Dshi_3880	0.27	-0.9
103,543	-		Dshi_3880	0.27	+0.0
103,543	-		Dshi_3880	0.27	+1.2
103,555	+		Dshi_3880	0.29	-0.4
103,555	+		Dshi_3880	0.29	+0.9
103,555	+		Dshi_3880	0.29	-2.5
103,555	+		Dshi_3880	0.29	-2.2
103,555	+		Dshi_3880	0.29	-0.7
103,563	-		Dshi_3880	0.31	+0.9
103,563	-		Dshi_3880	0.31	-0.5
103,571	+		Dshi_3880	0.32	+1.7
103,625	-		Dshi_3880	0.43	+0.2
103,625	-		Dshi_3880	0.43	+0.7
103,625	-		Dshi_3880	0.43	+0.3
103,625	-		Dshi_3880	0.43	-0.2
103,626	+		Dshi_3880	0.43	+0.4
103,626	+		Dshi_3880	0.43	+0.3
103,634	-		Dshi_3880	0.44	-0.0
103,634	-		Dshi_3880	0.44	+0.3
103,634	-		Dshi_3880	0.44	+0.7
103,634	-		Dshi_3880	0.44	-0.2
103,642	+		Dshi_3880	0.46	-0.1
103,642	-		Dshi_3880	0.46	-1.1
103,650	-		Dshi_3880	0.47	+0.3
103,653	-		Dshi_3880	0.48	+0.8
103,661	+		Dshi_3880	0.50	+3.5
103,661	+		Dshi_3880	0.50	-0.4
103,687	+		Dshi_3880	0.54	-1.0
103,689	+		Dshi_3880	0.55	-1.7
103,689	+		Dshi_3880	0.55	-1.0
103,696	+		Dshi_3880	0.56	-3.6
103,696	+		Dshi_3880	0.56	-0.3
103,696	+		Dshi_3880	0.56	+2.8
103,696	+		Dshi_3880	0.56	-1.9
103,696	+		Dshi_3880	0.56	-0.4
103,696	+		Dshi_3880	0.56	+0.5
103,696	+		Dshi_3880	0.56	+1.5
103,696	+		Dshi_3880	0.56	+0.4
103,704	-		Dshi_3880	0.58	-0.1
103,704	-		Dshi_3880	0.58	+2.5
103,704	-		Dshi_3880	0.58	-1.5
103,704	-		Dshi_3880	0.58	+0.9
103,704	-		Dshi_3880	0.58	-1.2
103,704	-		Dshi_3880	0.58	-0.5
103,704	-		Dshi_3880	0.58	-0.4
103,704	-		Dshi_3880	0.58	-1.9
103,706	+		Dshi_3880	0.58	-1.0
103,706	+		Dshi_3880	0.58	-0.5
103,708	+		Dshi_3880	0.58	-1.0
103,714	-		Dshi_3880	0.60	-0.6
103,714	-		Dshi_3880	0.60	-0.3
103,714	-		Dshi_3880	0.60	+0.5
103,714	-		Dshi_3880	0.60	-0.2
103,716	-		Dshi_3880	0.60	-0.1
103,768	-		Dshi_3880	0.70	-0.2
103,790	-		Dshi_3880	0.74	+0.9
103,801	-		Dshi_3880	0.76	+0.6
103,816	+		Dshi_3880	0.79	-0.6
103,816	+		Dshi_3880	0.79	-1.1
103,816	+		Dshi_3880	0.79	-1.1
103,816	+		Dshi_3880	0.79	+0.5
103,824	-		Dshi_3880	0.81	+1.1
103,824	-		Dshi_3880	0.81	-0.3
103,824	-		Dshi_3880	0.81	+3.5
103,826	+		Dshi_3880	0.81	+1.3
103,826	+		Dshi_3880	0.81	-0.2
103,826	+		Dshi_3880	0.81	-0.1
103,826	+		Dshi_3880	0.81	+1.2
103,829	+		Dshi_3880	0.82	-0.3
103,829	+		Dshi_3880	0.82	+0.3
103,834	-		Dshi_3880	0.82	-0.5
103,837	-		Dshi_3880	0.83	-0.9
103,837	-		Dshi_3880	0.83	+2.5
103,837	-		Dshi_3880	0.83	+0.7
103,837	-		Dshi_3880	0.83	+1.0
103,837	-		Dshi_3880	0.83	+0.7
103,847	-		Dshi_3880	0.85	+1.1
103,848	-		Dshi_3880	0.85	+0.5
103,848	-		Dshi_3880	0.85	+4.5
103,848	-		Dshi_3880	0.85	+1.1
103,893	-				-1.7
103,893	-				+0.5
103,909	+				-0.5
103,942	+				-0.5
103,942	+				+0.5
103,943	+				-0.5
103,950	+				-0.4
103,950	+				-0.3
103,950	+				-0.6
103,950	+				-2.1
103,950	+				-0.3
103,950	+				-0.8
103,950	-				-0.2
103,950	-				-0.4
103,958	-				-2.8
103,958	-				-0.8
103,958	-				-0.2
103,958	-				-0.9
103,958	-				+0.2
103,998	+				+0.7
103,998	+				-0.8
103,998	+				+0.6
103,998	+				+0.7
104,006	-				-0.1
104,010	+				-0.0
104,043	+				+0.9
104,048	+				+0.2
104,051	-				+1.5
104,066	+				-2.1
104,067	-				+3.0
104,090	+				-1.6
104,096	+				-0.8
104,103	+				-0.6
104,104	-				-1.7
104,104	-				-0.1
104,106	-				+1.1