Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3357

Experiment: m.b. nitrate 300 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. nitrate 300 mM
3,529,474	-				+1.7
3,529,474	-				-0.2
3,529,544	+				-0.7
3,529,562	-				+0.6
3,529,590	+				+0.2
3,529,590	+				-0.0
3,529,646	+				-0.3
3,529,646	+				+3.2
3,529,648	+				-1.7
3,529,653	-				-0.7
3,529,656	-				-0.7
3,529,658	+				+1.9
3,529,663	-				+0.2
3,529,668	-				-0.6
3,529,683	+				-0.9
3,529,744	-				+0.4
3,529,769	-				-0.2
3,529,806	+				+0.7
3,529,806	-				-0.0
3,529,813	-				+0.6
3,529,813	-				+0.7
3,529,825	+				-0.9
3,529,827	+				+1.7
3,529,832	+				-0.7
3,529,862	+				+3.0
3,529,867	+				+1.5
3,529,875	-				+0.4
3,529,892	-				+0.1
3,529,906	+				-0.7
3,529,913	+				+2.7
3,529,988	-				-0.4
3,529,990	+				+0.2
3,529,998	-				+0.4
3,529,998	-				-0.4
3,530,011	+				+0.9
3,530,019	-				+0.3
3,530,022	+				-1.0
3,530,022	+				-0.0
3,531,242	+				+0.3
3,531,242	+				+0.5
3,531,249	+				-0.9
3,531,249	+				+1.2
3,531,249	+				-0.9
3,531,249	+				+1.3
3,531,249	+				-0.2
3,531,249	+				+0.4
3,531,316	-				-0.3
3,531,370	+				+0.4
3,531,370	+				-0.3
3,531,380	-				-2.7
3,531,383	+				-0.1
3,531,437	+				-0.1
3,531,437	+				+1.6
3,531,437	+				-1.1
3,531,437	+				-1.5
3,531,438	+				-0.3
3,531,441	-				-0.4
3,531,442	+				+0.2
3,531,442	+				+2.7
3,531,445	-				-2.7
3,531,447	+				-0.3
3,531,447	+				+0.6
3,531,447	+				-0.2
3,531,447	+				+0.8
3,531,447	+				+0.1
3,531,447	+				+1.0
3,531,447	+				+0.1
3,531,447	+				-1.1
3,531,447	+				+0.2
3,531,450	-				+0.2
3,531,453	-				-0.6
3,531,453	-				+0.6
3,531,453	-				+0.6
3,531,455	-				-2.1
3,531,455	-				+0.1
3,531,455	-				+0.5
3,531,455	-				-0.7
3,531,455	-				+1.3
3,531,458	-				+1.7
3,531,469	+				+0.2
3,531,477	+				+0.8
3,531,479	-				-2.0
3,531,484	-				-0.6
3,531,502	-				+0.0
3,531,509	+				-0.3
3,531,515	+				+0.5
3,531,515	+				-1.3
3,531,516	-				+1.0
3,531,517	-				+1.3
3,531,517	-				-0.3
3,531,517	-				-1.5
3,531,521	+				+0.7
3,531,530	+				+2.9
3,531,530	+				-1.6
3,531,530	+				-1.8
3,531,538	-				-0.2
3,531,538	-				-0.1
3,531,540	+				-0.4
3,531,543	-				+0.5
3,531,545	+				+0.4
3,531,545	+				-0.0
3,531,553	-				-0.0
3,531,553	-				+0.2
3,531,553	-				-1.9
3,531,553	-				+1.0
3,531,553	-				+1.1
3,531,553	-				+3.6
3,531,553	-				+0.2
3,531,553	-				-0.9
3,531,553	-				-0.8
3,531,571	+				+0.6
3,531,580	+				-0.1
3,531,581	+				-1.4
3,531,582	+				-0.9
3,531,582	+				+2.6
3,531,582	+				-0.9
3,531,582	+				-0.5
3,531,583	+				-0.9
3,531,584	-				+0.8
3,531,590	-				+0.6
3,531,590	-				+0.4
3,531,590	-				+0.3
3,531,590	-				-0.1
3,531,594	+				-1.4
3,531,594	+				-0.8
3,531,599	+				+1.7
3,531,602	-				-1.0
3,531,602	-				+1.2
3,531,602	-				+0.7
3,531,609	+				-0.5
3,531,609	+				+0.4
3,531,609	+				+2.4
3,531,609	+				-0.5
3,531,609	+				-0.4
3,531,609	+				-0.5
3,531,609	+				-0.7
3,531,609	+				-0.3
3,531,609	+				-0.2
3,531,609	+				-0.6
3,531,612	-				-0.2
3,531,612	-				-0.5
3,531,612	-				-0.4
3,531,614	+				-1.6
3,531,617	-				-0.6
3,531,617	-				+0.3
3,531,617	-				-0.5
3,531,617	-				+1.0
3,531,617	-				-0.3
3,531,617	-				-1.2
3,531,617	-				-2.4
3,531,617	-				+1.1
3,531,647	+		Dshi_3358	0.13	+0.6
3,531,667	-		Dshi_3358	0.15	+1.3
3,531,685	+		Dshi_3358	0.17	+0.4
3,531,685	+		Dshi_3358	0.17	-1.5
3,531,697	+		Dshi_3358	0.19	-0.2
3,531,742	-		Dshi_3358	0.25	+1.2
3,531,752	+		Dshi_3358	0.26	+0.4
3,531,755	-		Dshi_3358	0.26	-0.2
3,531,763	+		Dshi_3358	0.27	+0.8
3,531,781	+		Dshi_3358	0.30	-0.2
3,531,787	+		Dshi_3358	0.30	-0.1
3,531,792	+		Dshi_3358	0.31	-1.0
3,531,792	+		Dshi_3358	0.31	-0.7
3,531,792	+		Dshi_3358	0.31	+2.3
3,531,792	+		Dshi_3358	0.31	+0.1
3,531,795	-		Dshi_3358	0.31	+0.2
3,531,795	-		Dshi_3358	0.31	-0.4
3,531,800	+		Dshi_3358	0.32	+0.1
3,531,800	+		Dshi_3358	0.32	+1.1
3,531,800	-		Dshi_3358	0.32	-0.6
3,531,802	+		Dshi_3358	0.32	-0.7
3,531,802	+		Dshi_3358	0.32	-2.3
3,531,802	+		Dshi_3358	0.32	+1.3
3,531,802	+		Dshi_3358	0.32	+0.9
3,531,802	+		Dshi_3358	0.32	+0.2
3,531,802	+		Dshi_3358	0.32	+0.5
3,531,802	+		Dshi_3358	0.32	-1.1
3,531,802	+		Dshi_3358	0.32	+0.4
3,531,808	-		Dshi_3358	0.33	+0.7
3,531,808	-		Dshi_3358	0.33	+0.4
3,531,808	-		Dshi_3358	0.33	-0.0
3,531,808	-		Dshi_3358	0.33	-0.6
3,531,808	-		Dshi_3358	0.33	+1.3
3,531,810	-		Dshi_3358	0.33	-0.7
3,531,810	-		Dshi_3358	0.33	+2.0
3,531,810	-		Dshi_3358	0.33	-1.2
3,531,810	-		Dshi_3358	0.33	-0.9
3,531,810	-		Dshi_3358	0.33	+1.2
3,531,810	-		Dshi_3358	0.33	-0.5
3,531,810	-		Dshi_3358	0.33	+0.1
3,531,810	-		Dshi_3358	0.33	+0.6
3,531,810	-		Dshi_3358	0.33	-0.6
3,531,810	-		Dshi_3358	0.33	-1.0
3,531,810	-		Dshi_3358	0.33	-0.0
3,531,810	-		Dshi_3358	0.33	-0.8
3,531,810	-		Dshi_3358	0.33	+0.1
3,531,810	-		Dshi_3358	0.33	+1.0
3,531,810	-		Dshi_3358	0.33	-0.6
3,531,818	+		Dshi_3358	0.34	+0.6
3,531,873	+		Dshi_3358	0.41	-0.4
3,531,874	+		Dshi_3358	0.41	+2.8
3,531,874	+		Dshi_3358	0.41	+1.3
3,531,874	+		Dshi_3358	0.41	-0.1
3,531,874	+		Dshi_3358	0.41	-0.8
3,531,874	+		Dshi_3358	0.41	+0.5
3,531,874	+		Dshi_3358	0.41	+2.2
3,531,879	+		Dshi_3358	0.42	+1.2
3,531,881	+		Dshi_3358	0.42	-0.2
3,531,882	-		Dshi_3358	0.42	+1.2
3,531,882	-		Dshi_3358	0.42	+0.2
3,531,882	-		Dshi_3358	0.42	-0.1
3,531,882	-		Dshi_3358	0.42	+0.6
3,531,882	-		Dshi_3358	0.42	+0.6
3,531,882	-		Dshi_3358	0.42	-0.6
3,531,882	-		Dshi_3358	0.42	-0.1
3,531,882	-		Dshi_3358	0.42	-1.1
3,531,882	-		Dshi_3358	0.42	-0.2
3,531,882	-		Dshi_3358	0.42	-0.1
3,531,882	-		Dshi_3358	0.42	+0.3
3,531,884	+		Dshi_3358	0.43	+0.7
3,531,884	+		Dshi_3358	0.43	+2.0
3,531,884	+		Dshi_3358	0.43	-1.1
3,531,884	+		Dshi_3358	0.43	-0.2
3,531,884	+		Dshi_3358	0.43	-0.4
3,531,884	+		Dshi_3358	0.43	-0.6
3,531,884	+		Dshi_3358	0.43	+3.2
3,531,884	+		Dshi_3358	0.43	-0.0
3,531,884	+		Dshi_3358	0.43	+0.0
3,531,887	-		Dshi_3358	0.43	-0.4
3,531,887	-		Dshi_3358	0.43	+1.1
3,531,892	-		Dshi_3358	0.44	-1.0
3,531,892	-		Dshi_3358	0.44	+2.4
3,531,892	-		Dshi_3358	0.44	+0.2
3,531,892	-		Dshi_3358	0.44	+0.6
3,531,894	-		Dshi_3358	0.44	-0.3
3,531,899	-		Dshi_3358	0.44	+0.3
3,531,908	+		Dshi_3358	0.46	-0.2
3,531,915	-		Dshi_3358	0.46	-0.3
3,531,965	-		Dshi_3358	0.53	-1.1
3,531,967	+		Dshi_3358	0.53	+3.0
3,531,967	+		Dshi_3358	0.53	+0.3
3,531,972	+		Dshi_3358	0.54	-0.5
3,531,972	+		Dshi_3358	0.54	-0.6
3,531,975	-		Dshi_3358	0.54	+2.2
3,531,975	-		Dshi_3358	0.54	-0.9
3,531,990	+		Dshi_3358	0.56	-0.8
3,531,991	+		Dshi_3358	0.56	-0.3
3,531,991	+		Dshi_3358	0.56	-0.5
3,531,991	+		Dshi_3358	0.56	+1.2
3,531,991	+		Dshi_3358	0.56	+0.1
3,531,991	+		Dshi_3358	0.56	+2.0
3,531,996	+		Dshi_3358	0.57	-1.3
3,531,998	-		Dshi_3358	0.57	-0.2
3,531,998	-		Dshi_3358	0.57	-0.2
3,531,998	-		Dshi_3358	0.57	-3.1
3,531,998	-		Dshi_3358	0.57	+1.6
3,531,998	-		Dshi_3358	0.57	-1.6
3,531,999	-		Dshi_3358	0.57	+0.1
3,531,999	-		Dshi_3358	0.57	+0.1
3,531,999	-		Dshi_3358	0.57	+1.7
3,532,002	+		Dshi_3358	0.57	+1.3
3,532,002	+		Dshi_3358	0.57	+0.7
3,532,004	-		Dshi_3358	0.58	+1.2
3,532,010	-		Dshi_3358	0.58	+0.4
3,532,010	-		Dshi_3358	0.58	+0.4
3,532,011	-		Dshi_3358	0.59	-3.3
3,532,021	-		Dshi_3358	0.60	-0.3
3,532,029	-		Dshi_3358	0.61	-0.3
3,532,033	-		Dshi_3358	0.61	+0.1
3,532,038	-		Dshi_3358	0.62	-2.3
3,532,069	-		Dshi_3358	0.66	+0.7
3,532,097	+		Dshi_3358	0.69	-0.4
3,532,111	+		Dshi_3358	0.71	-0.4
3,532,124	-		Dshi_3358	0.73	+1.1
3,532,169	+		Dshi_3358	0.79	+1.5
3,532,169	+		Dshi_3358	0.79	+1.7
3,532,169	+		Dshi_3358	0.79	+1.4
3,532,169	+		Dshi_3358	0.79	-0.7
3,532,169	+		Dshi_3358	0.79	-0.6
3,532,177	-		Dshi_3358	0.80	-1.2
3,532,177	-		Dshi_3358	0.80	-0.2
3,532,177	-		Dshi_3358	0.80	-0.4
3,532,177	-		Dshi_3358	0.80	-0.2
3,532,177	-		Dshi_3358	0.80	-0.1
3,532,177	-		Dshi_3358	0.80	-0.3
3,532,182	-		Dshi_3358	0.80	+0.5
3,532,187	+		Dshi_3358	0.81	+0.2
3,532,187	+		Dshi_3358	0.81	-0.4
3,532,187	+		Dshi_3358	0.81	-0.3
3,532,187	+		Dshi_3358	0.81	+0.5
3,532,187	-		Dshi_3358	0.81	-0.0