Experiment: m.b. nitrate 300 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_3355 and Dshi_3356 are separated by 992 nucleotides Dshi_3356 and Dshi_3357 are separated by 23 nucleotides
Dshi_3355: Dshi_3355 - DNA gyrase, B subunit (RefSeq), at 3,526,685 to 3,529,102
_3355
Dshi_3356: Dshi_3356 - transposase IS3/IS911 family protein (RefSeq), at 3,530,095 to 3,530,361
_3356
Dshi_3357: Dshi_3357 - Integrase catalytic region (RefSeq), at 3,530,385 to 3,531,194
_3357
Position (kb)
3530
3531 Strain fitness (log2 ratio)
-1
0
1
2
3 at 3529.150 kb on + strand at 3529.194 kb on + strand at 3529.216 kb on + strand at 3529.274 kb on + strand at 3529.274 kb on + strand at 3529.276 kb on + strand at 3529.284 kb on - strand at 3529.290 kb on - strand at 3529.353 kb on - strand at 3529.360 kb on + strand at 3529.360 kb on + strand at 3529.360 kb on + strand at 3529.368 kb on - strand at 3529.368 kb on - strand at 3529.474 kb on - strand at 3529.474 kb on - strand at 3529.544 kb on + strand at 3529.562 kb on - strand at 3529.590 kb on + strand at 3529.590 kb on + strand at 3529.646 kb on + strand at 3529.646 kb on + strand at 3529.648 kb on + strand at 3529.653 kb on - strand at 3529.656 kb on - strand at 3529.658 kb on + strand at 3529.663 kb on - strand at 3529.668 kb on - strand at 3529.683 kb on + strand at 3529.744 kb on - strand at 3529.769 kb on - strand at 3529.806 kb on + strand at 3529.806 kb on - strand at 3529.813 kb on - strand at 3529.813 kb on - strand at 3529.825 kb on + strand at 3529.827 kb on + strand at 3529.832 kb on + strand at 3529.862 kb on + strand at 3529.867 kb on + strand at 3529.875 kb on - strand at 3529.892 kb on - strand at 3529.906 kb on + strand at 3529.913 kb on + strand at 3529.988 kb on - strand at 3529.990 kb on + strand at 3529.998 kb on - strand at 3529.998 kb on - strand at 3530.011 kb on + strand at 3530.019 kb on - strand at 3530.022 kb on + strand at 3530.022 kb on + strand at 3531.242 kb on + strand at 3531.242 kb on + strand at 3531.249 kb on + strand at 3531.249 kb on + strand at 3531.249 kb on + strand at 3531.249 kb on + strand at 3531.249 kb on + strand at 3531.249 kb on + strand at 3531.316 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. nitrate 300 mM remove 3,529,150 + -0.6 3,529,194 + -0.6 3,529,216 + -1.5 3,529,274 + -0.7 3,529,274 + -0.1 3,529,276 + -0.5 3,529,284 - +0.8 3,529,290 - -0.2 3,529,353 - +0.2 3,529,360 + -0.3 3,529,360 + -0.7 3,529,360 + +2.0 3,529,368 - +1.7 3,529,368 - -1.6 3,529,474 - +1.7 3,529,474 - -0.2 3,529,544 + -0.7 3,529,562 - +0.6 3,529,590 + +0.2 3,529,590 + -0.0 3,529,646 + -0.3 3,529,646 + +3.2 3,529,648 + -1.7 3,529,653 - -0.7 3,529,656 - -0.7 3,529,658 + +1.9 3,529,663 - +0.2 3,529,668 - -0.6 3,529,683 + -0.9 3,529,744 - +0.4 3,529,769 - -0.2 3,529,806 + +0.7 3,529,806 - -0.0 3,529,813 - +0.6 3,529,813 - +0.7 3,529,825 + -0.9 3,529,827 + +1.7 3,529,832 + -0.7 3,529,862 + +3.0 3,529,867 + +1.5 3,529,875 - +0.4 3,529,892 - +0.1 3,529,906 + -0.7 3,529,913 + +2.7 3,529,988 - -0.4 3,529,990 + +0.2 3,529,998 - +0.4 3,529,998 - -0.4 3,530,011 + +0.9 3,530,019 - +0.3 3,530,022 + -1.0 3,530,022 + -0.0 3,531,242 + +0.3 3,531,242 + +0.5 3,531,249 + -0.9 3,531,249 + +1.2 3,531,249 + -0.9 3,531,249 + +1.3 3,531,249 + -0.2 3,531,249 + +0.4 3,531,316 - -0.3
Or see this region's nucleotide sequence