Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2396

Experiment: m.b. nitrate 300 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDshi_2394 and Dshi_2395 overlap by 4 nucleotidesDshi_2395 and Dshi_2396 are separated by 134 nucleotidesDshi_2396 and Dshi_2397 are separated by 368 nucleotides Dshi_2394: Dshi_2394 - transcriptional regulator, AsnC family (RefSeq), at 2,528,605 to 2,529,063 _2394 Dshi_2395: Dshi_2395 - transcriptional regulator, AsnC family (RefSeq), at 2,529,060 to 2,529,518 _2395 Dshi_2396: Dshi_2396 - ketol-acid reductoisomerase (RefSeq), at 2,529,653 to 2,530,675 _2396 Dshi_2397: Dshi_2397 - phosphoglucosamine mutase (RefSeq), at 2,531,044 to 2,532,387 _2397 Position (kb) 2529 2530 2531Strain fitness (log2 ratio) -1 0 1 2at 2529.038 kb on + strandat 2531.040 kb on + strandat 2531.066 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. nitrate 300 mM
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2,529,038 + +1.2
2,531,040 + +1.8
2,531,066 + +0.2

Or see this region's nucleotide sequence