Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_0394

Experiment: m.b. nitrate 300 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. nitrate 300 mM
382,980	-		Dshi_0392	0.60	-0.4
383,031	-		Dshi_0392	0.65	+0.4
383,036	-		Dshi_0392	0.65	-0.5
383,052	-		Dshi_0392	0.66	-0.4
383,061	+		Dshi_0392	0.67	-0.3
383,061	+		Dshi_0392	0.67	+0.2
383,061	+		Dshi_0392	0.67	-1.3
383,071	+		Dshi_0392	0.68	-0.8
383,098	+		Dshi_0392	0.70	+0.2
383,106	+		Dshi_0392	0.71	-0.3
383,114	+		Dshi_0392	0.72	-1.1
383,124	+		Dshi_0392	0.73	-0.3
383,129	+		Dshi_0392	0.73	-1.8
383,143	+		Dshi_0392	0.74	-0.1
383,147	-		Dshi_0392	0.75	+0.9
383,147	-		Dshi_0392	0.75	-0.6
383,147	-		Dshi_0392	0.75	-0.6
383,186	+		Dshi_0392	0.78	-0.6
383,216	+		Dshi_0392	0.81	+0.5
383,216	+		Dshi_0392	0.81	+0.4
383,224	-		Dshi_0392	0.81	-0.0
383,226	+		Dshi_0392	0.82	-0.2
383,226	+		Dshi_0392	0.82	-0.9
383,226	+		Dshi_0392	0.82	-1.6
383,226	+		Dshi_0392	0.82	+0.4
383,226	+		Dshi_0392	0.82	-0.6
383,226	+		Dshi_0392	0.82	+0.4
383,226	+		Dshi_0392	0.82	+4.2
383,226	+		Dshi_0392	0.82	+0.4
383,230	-		Dshi_0392	0.82	+1.6
383,234	+		Dshi_0392	0.82	-0.9
383,234	+		Dshi_0392	0.82	-0.2
383,234	-		Dshi_0392	0.82	-0.8
383,234	-		Dshi_0392	0.82	+1.5
383,234	-		Dshi_0392	0.82	-0.5
383,234	-		Dshi_0392	0.82	-1.2
383,234	-		Dshi_0392	0.82	+0.4
383,234	-		Dshi_0392	0.82	-0.1
383,234	-		Dshi_0392	0.82	+0.2
383,234	-		Dshi_0392	0.82	+0.0
383,234	-		Dshi_0392	0.82	-1.0
383,234	-		Dshi_0392	0.82	+1.6
383,234	-		Dshi_0392	0.82	+1.0
383,241	-		Dshi_0392	0.83	-2.9
383,241	-		Dshi_0392	0.83	-0.5
383,241	-		Dshi_0392	0.83	-0.5
383,241	-		Dshi_0392	0.83	+0.2
383,242	-		Dshi_0392	0.83	-0.7
383,246	-		Dshi_0392	0.83	+0.6
383,248	+		Dshi_0392	0.83	-0.3
383,256	-		Dshi_0392	0.84	+0.3
383,267	+		Dshi_0392	0.85	-0.3
383,310	-		Dshi_0392	0.89	-0.2
383,323	+				-0.0
383,324	-				+0.9
383,343	+				+0.3
383,360	-				+0.1
383,368	-				-0.8
383,395	+				-1.2
383,395	+				-1.4
383,395	+				-0.6
383,395	+				+0.2
383,395	+				-0.8
383,395	+				-1.9
383,395	+				+0.3
383,395	+				+0.1
383,395	+				+0.1
383,395	+				-0.1
383,395	+				+0.3
383,395	+				-0.2
383,395	+				+0.6
383,395	+				-0.2
383,395	+				-2.7
383,395	+				-0.5
383,395	+				+0.3
383,395	+				+0.2
383,395	+				-1.2
383,395	+				-0.8
383,395	+				+0.8
383,395	+				+0.6
383,403	-				+1.6
383,403	-				-0.3
383,403	-				+0.5
383,403	-				+0.3
383,403	-				+1.2
383,403	-				+0.2
383,403	-				-0.7
383,403	-				-0.1
383,403	-				+0.0
383,403	-				-0.8
383,403	-				+1.4
383,403	-				-0.2
383,403	-				-0.8
383,403	-				-0.2
383,403	-				-0.5
383,403	-				-0.8
383,403	-				-1.6
383,403	-				-1.7
383,404	+				+0.6
383,412	-				+0.0
383,413	-				+0.3
383,413	-				-0.5
383,417	-				+4.2
383,417	-				+1.5
383,423	-				+0.4
383,428	-				-1.0
383,433	+				+1.3
383,433	+				+1.3
383,433	+				+0.5
383,433	+				+0.3
383,433	+				-1.2
383,433	+				+4.7
383,433	+				+0.2
383,433	+				+0.3
383,435	+				-0.7
383,441	-				-0.3
383,441	-				-2.1
383,441	-				-0.1
383,443	-				+0.0
383,443	-				+4.9
383,479	-				-0.4
383,487	+				+0.1
383,496	-				-0.3
383,497	-				+0.7
383,509	+				+0.7
383,524	+				+3.2
383,543	-				-1.6
383,545	+				-0.3
383,550	+				-0.2
383,558	+				+0.5
383,566	+				-0.4
383,569	+				+1.9
383,574	+				+1.2
383,603	-				+0.9
383,620	+				-0.2
383,632	+				+1.3
383,636	+				+1.9
383,654	-				-2.5
383,698	+				-1.8
383,706	+				+0.6
383,706	+				+0.1
383,707	-				-0.3
383,713	+				+2.3
383,714	-				-1.0
383,714	-				-0.9
383,714	-				+0.2
383,714	-				-0.8
383,744	-		Dshi_0393	0.21	-0.6
383,744	-		Dshi_0393	0.21	-0.7
383,744	-		Dshi_0393	0.21	-0.3
383,744	-		Dshi_0393	0.21	+1.4
383,784	-		Dshi_0393	0.39	-0.4
383,789	-		Dshi_0393	0.41	+0.4
383,799	-		Dshi_0393	0.46	+1.5
383,801	-		Dshi_0393	0.47	+0.1
383,801	-		Dshi_0393	0.47	+1.6
383,831	-		Dshi_0393	0.60	+0.9
383,843	+		Dshi_0393	0.66	+0.5
383,843	+		Dshi_0393	0.66	+0.3
383,889	+		Dshi_0393	0.86	-0.9
383,894	+		Dshi_0393	0.89	-0.2
383,899	+				-0.4
383,899	+				-0.1
383,902	-				+2.3
383,907	-				+3.9
383,907	-				+1.8
383,909	-				-0.9
383,914	+				+1.3
383,969	-				+0.8
383,978	-				+1.5
383,979	+				-0.6
383,980	+				-0.4
383,989	+				-1.2
384,040	-				-0.0
384,082	+		Dshi_0394	0.13	+0.1
384,082	+		Dshi_0394	0.13	-1.2
384,082	+		Dshi_0394	0.13	+0.3
384,109	+		Dshi_0394	0.17	+0.7
384,109	-		Dshi_0394	0.17	-0.2
384,115	-		Dshi_0394	0.18	-0.5
384,117	-		Dshi_0394	0.18	+2.1
384,165	+		Dshi_0394	0.24	+0.9
384,174	+		Dshi_0394	0.25	+0.1
384,183	+		Dshi_0394	0.26	+0.9
384,191	-		Dshi_0394	0.28	+1.0
384,207	+		Dshi_0394	0.30	+0.7
384,210	-		Dshi_0394	0.30	+3.7
384,214	-		Dshi_0394	0.30	-1.2
384,224	+		Dshi_0394	0.32	+0.1
384,227	-		Dshi_0394	0.32	-0.5
384,253	-		Dshi_0394	0.36	-0.6
384,260	+		Dshi_0394	0.36	-0.7
384,265	+		Dshi_0394	0.37	-0.3
384,265	+		Dshi_0394	0.37	-0.4
384,270	-		Dshi_0394	0.38	-0.1
384,282	-		Dshi_0394	0.39	+1.0
384,300	+		Dshi_0394	0.42	-0.3
384,338	-		Dshi_0394	0.47	-0.9
384,352	-		Dshi_0394	0.48	-0.5
384,363	+		Dshi_0394	0.50	-1.9
384,363	+		Dshi_0394	0.50	+0.0
384,363	+		Dshi_0394	0.50	+0.6
384,363	+		Dshi_0394	0.50	-0.9
384,363	+		Dshi_0394	0.50	+0.5
384,364	-		Dshi_0394	0.50	+0.5
384,364	-		Dshi_0394	0.50	+0.3
384,371	-		Dshi_0394	0.51	+1.2
384,371	-		Dshi_0394	0.51	+0.8
384,371	-		Dshi_0394	0.51	-0.3
384,400	+		Dshi_0394	0.55	+2.7
384,400	+		Dshi_0394	0.55	+0.2
384,400	+		Dshi_0394	0.55	-0.5
384,400	+		Dshi_0394	0.55	-1.5
384,400	+		Dshi_0394	0.55	-1.0
384,407	+		Dshi_0394	0.55	-0.9
384,408	-		Dshi_0394	0.56	-0.5
384,412	+		Dshi_0394	0.56	+0.1
384,420	+		Dshi_0394	0.57	+0.2
384,422	-		Dshi_0394	0.57	-0.6
384,436	+		Dshi_0394	0.59	+0.1
384,436	+		Dshi_0394	0.59	-0.8
384,436	+		Dshi_0394	0.59	-0.9
384,443	+		Dshi_0394	0.60	-0.1
384,456	+		Dshi_0394	0.62	-0.7
384,513	-		Dshi_0394	0.69	-1.1
384,520	-		Dshi_0394	0.70	-0.7
384,521	+		Dshi_0394	0.70	+0.6
384,521	+		Dshi_0394	0.70	-0.8
384,521	+		Dshi_0394	0.70	-0.4
384,521	+		Dshi_0394	0.70	+0.3
384,521	+		Dshi_0394	0.70	-0.6
384,521	+		Dshi_0394	0.70	-1.3
384,521	+		Dshi_0394	0.70	-0.9
384,529	-		Dshi_0394	0.71	+1.2
384,529	-		Dshi_0394	0.71	-0.0
384,529	-		Dshi_0394	0.71	-0.5
384,529	-		Dshi_0394	0.71	+0.7
384,529	-		Dshi_0394	0.71	+0.3
384,529	-		Dshi_0394	0.71	+0.3
384,529	-		Dshi_0394	0.71	-0.5
384,529	-		Dshi_0394	0.71	-0.7
384,540	+		Dshi_0394	0.73	-0.1
384,548	-		Dshi_0394	0.74	-1.1
384,548	-		Dshi_0394	0.74	-0.7
384,548	-		Dshi_0394	0.74	-0.2
384,556	+		Dshi_0394	0.75	+0.1
384,576	+		Dshi_0394	0.77	-2.0
384,595	+		Dshi_0394	0.80	+1.3
384,602	-		Dshi_0394	0.81	-2.8
384,605	+		Dshi_0394	0.81	-0.7
384,613	-		Dshi_0394	0.82	-0.7
384,615	+		Dshi_0394	0.82	+0.5
384,652	+		Dshi_0394	0.87	-0.0
384,652	+		Dshi_0394	0.87	+0.1
384,652	-		Dshi_0394	0.87	+0.4
384,657	-		Dshi_0394	0.88	-0.3
384,660	-		Dshi_0394	0.88	+2.9
384,660	-		Dshi_0394	0.88	-0.7
384,660	-		Dshi_0394	0.88	+0.3
384,660	-		Dshi_0394	0.88	-0.6
384,660	-		Dshi_0394	0.88	-1.2
384,660	-		Dshi_0394	0.88	+2.3
384,662	+		Dshi_0394	0.88	+2.0
384,662	+		Dshi_0394	0.88	+0.1
384,662	+		Dshi_0394	0.88	+0.6
384,662	+		Dshi_0394	0.88	+0.5
384,662	+		Dshi_0394	0.88	-0.2
384,662	+		Dshi_0394	0.88	-0.2
384,662	+		Dshi_0394	0.88	+0.2
384,662	+		Dshi_0394	0.88	-0.4
384,662	+		Dshi_0394	0.88	-0.2
384,662	+		Dshi_0394	0.88	-1.5
384,662	+		Dshi_0394	0.88	-0.1
384,662	+		Dshi_0394	0.88	-0.6
384,662	+		Dshi_0394	0.88	+0.8
384,662	+		Dshi_0394	0.88	+1.2
384,662	+		Dshi_0394	0.88	-3.1
384,662	+		Dshi_0394	0.88	+1.0
384,662	+		Dshi_0394	0.88	+0.2
384,662	+		Dshi_0394	0.88	+1.6
384,662	+		Dshi_0394	0.88	-0.3
384,662	+		Dshi_0394	0.88	-0.3
384,662	+		Dshi_0394	0.88	+1.7
384,662	+		Dshi_0394	0.88	-0.1
384,662	+		Dshi_0394	0.88	+1.0
384,662	+		Dshi_0394	0.88	-0.3
384,662	+		Dshi_0394	0.88	-2.5
384,662	+		Dshi_0394	0.88	-0.3
384,662	+		Dshi_0394	0.88	-0.8
384,662	+		Dshi_0394	0.88	+1.8
384,662	+		Dshi_0394	0.88	-1.9
384,662	+		Dshi_0394	0.88	-0.8
384,662	+		Dshi_0394	0.88	-1.0
384,662	+		Dshi_0394	0.88	+0.0
384,662	+		Dshi_0394	0.88	+0.6
384,662	+		Dshi_0394	0.88	-0.3
384,662	-		Dshi_0394	0.88	-0.1
384,670	-		Dshi_0394	0.89	+0.5
384,670	-		Dshi_0394	0.89	-0.4
384,670	-		Dshi_0394	0.89	+0.2
384,670	-		Dshi_0394	0.89	-1.2
384,670	-		Dshi_0394	0.89	+0.7
384,670	-		Dshi_0394	0.89	+0.3
384,670	-		Dshi_0394	0.89	-1.1
384,670	-		Dshi_0394	0.89	-0.2
384,670	-		Dshi_0394	0.89	-1.1
384,670	-		Dshi_0394	0.89	+0.8
384,670	-		Dshi_0394	0.89	-0.1
384,670	-		Dshi_0394	0.89	+0.4
384,670	-		Dshi_0394	0.89	+0.5
384,670	-		Dshi_0394	0.89	-0.2
384,670	-		Dshi_0394	0.89	+0.9
384,670	-		Dshi_0394	0.89	+1.7
384,670	-		Dshi_0394	0.89	+1.2
384,670	-		Dshi_0394	0.89	+0.2
384,670	-		Dshi_0394	0.89	+3.9
384,670	-		Dshi_0394	0.89	-1.4
384,670	-		Dshi_0394	0.89	-0.2
384,670	-		Dshi_0394	0.89	-0.1
384,670	-		Dshi_0394	0.89	+1.2
384,670	-		Dshi_0394	0.89	-0.2
384,670	-		Dshi_0394	0.89	-0.6
384,670	-		Dshi_0394	0.89	-0.6
384,670	-		Dshi_0394	0.89	-1.7
384,670	-		Dshi_0394	0.89	-0.4
384,670	-		Dshi_0394	0.89	+0.3
384,670	-		Dshi_0394	0.89	-0.2
384,670	-		Dshi_0394	0.89	-0.7
384,700	+				+0.5
384,703	-				+0.1
384,708	-				-1.2
384,708	-				-0.4
384,708	-				-1.1
384,713	-				-1.9
384,762	-				-0.1
384,762	-				-1.8
384,764	+				+0.2
384,769	+				+0.5
384,776	-				+0.3
384,777	-				+0.6
384,777	-				-0.6
384,777	-				-0.1
384,785	+				-1.7
384,788	+				+1.9
384,793	-				+1.9
384,793	-				+3.1
384,796	-				-0.6
384,796	-				-2.0
384,806	+				+2.7
384,811	+				+0.6
384,812	+				-0.9
384,812	+				-0.2
384,818	+				+1.8
384,820	+				+0.3
384,820	-				-2.0
384,820	-				-1.0
384,821	-				+0.4
384,825	+				-0.5
384,825	+				+0.2
384,826	-				+0.6
384,827	-				-0.1
384,828	-				-0.2
384,830	+				-1.2
384,830	+				+0.1
384,833	-				-1.9
384,833	-				-0.9
384,833	-				-0.5
384,834	-				-1.6
384,838	+				+0.2
384,838	+				-0.8
384,861	-				-2.5
384,861	-				+0.0
384,871	+				+0.4
384,871	+				+0.2
384,871	+				-0.9
384,871	+				-0.8
384,878	+				+2.2
384,878	+				-0.1
384,878	+				-2.8
384,878	+				-0.6
384,878	+				-0.9
384,878	+				-0.4
384,878	+				+1.3
384,879	-				-1.0
384,886	-		Dshi_0395	0.10	-0.1
384,888	+		Dshi_0395	0.10	-1.2
384,888	+		Dshi_0395	0.10	+0.3
384,888	+		Dshi_0395	0.10	+2.7
384,888	+		Dshi_0395	0.10	-0.1
384,888	+		Dshi_0395	0.10	-0.1
384,896	-		Dshi_0395	0.11	-1.5
384,896	-		Dshi_0395	0.11	-0.5
384,896	-		Dshi_0395	0.11	-0.8
384,896	-		Dshi_0395	0.11	-1.0
384,896	-		Dshi_0395	0.11	-1.0
384,908	+		Dshi_0395	0.12	+1.2
384,908	+		Dshi_0395	0.12	+0.2
384,908	+		Dshi_0395	0.12	+2.1
384,908	+		Dshi_0395	0.12	-2.0
384,908	+		Dshi_0395	0.12	+0.3
384,908	+		Dshi_0395	0.12	-0.5
384,908	+		Dshi_0395	0.12	-0.0
384,916	-		Dshi_0395	0.13	-1.3
384,936	+		Dshi_0395	0.14	+0.5
384,938	+		Dshi_0395	0.14	+0.3
384,947	+		Dshi_0395	0.15	-0.5
384,984	-		Dshi_0395	0.18	+0.9
384,986	+		Dshi_0395	0.19	-1.3
384,994	+		Dshi_0395	0.19	-0.1
385,042	-		Dshi_0395	0.23	+0.5
385,047	-		Dshi_0395	0.24	+0.6
385,049	+		Dshi_0395	0.24	+0.2
385,049	+		Dshi_0395	0.24	+0.6
385,067	+		Dshi_0395	0.25	+0.1
385,074	-		Dshi_0395	0.26	+0.8
385,074	-		Dshi_0395	0.26	-0.1
385,086	+		Dshi_0395	0.27	-1.4
385,105	+		Dshi_0395	0.28	+0.3
385,117	+		Dshi_0395	0.29	-0.2
385,119	+		Dshi_0395	0.30	+1.4
385,119	+		Dshi_0395	0.30	-0.3
385,119	+		Dshi_0395	0.30	-0.4
385,119	+		Dshi_0395	0.30	-0.3
385,119	+		Dshi_0395	0.30	+0.7
385,119	+		Dshi_0395	0.30	-1.0
385,119	+		Dshi_0395	0.30	+1.8
385,127	-		Dshi_0395	0.30	-0.2
385,127	-		Dshi_0395	0.30	+0.1
385,127	-		Dshi_0395	0.30	-0.6
385,127	-		Dshi_0395	0.30	-0.3
385,127	-		Dshi_0395	0.30	+1.2
385,127	-		Dshi_0395	0.30	-0.2
385,138	+		Dshi_0395	0.31	+0.2
385,143	+		Dshi_0395	0.32	-1.7
385,184	+		Dshi_0395	0.35	-1.2
385,199	+		Dshi_0395	0.36	+2.9
385,199	+		Dshi_0395	0.36	+0.2
385,199	+		Dshi_0395	0.36	+0.3
385,199	+		Dshi_0395	0.36	-0.2
385,199	+		Dshi_0395	0.36	+0.6
385,199	+		Dshi_0395	0.36	+2.6
385,199	+		Dshi_0395	0.36	+0.3
385,199	+		Dshi_0395	0.36	-0.0
385,204	+		Dshi_0395	0.37	+2.0
385,204	+		Dshi_0395	0.37	-0.4
385,207	-		Dshi_0395	0.37	+0.6
385,207	-		Dshi_0395	0.37	-1.4
385,207	-		Dshi_0395	0.37	-1.1
385,207	-		Dshi_0395	0.37	-0.7
385,279	+		Dshi_0395	0.43	-0.7
385,279	+		Dshi_0395	0.43	+1.0
385,280	+		Dshi_0395	0.43	+1.0
385,280	+		Dshi_0395	0.43	-0.3
385,307	-		Dshi_0395	0.45	+0.3
385,319	-		Dshi_0395	0.46	+0.5
385,357	-		Dshi_0395	0.50	-1.4
385,402	+		Dshi_0395	0.53	+1.8
385,403	+		Dshi_0395	0.53	+0.2
385,403	+		Dshi_0395	0.53	+0.4
385,410	-		Dshi_0395	0.54	-0.9
385,418	+		Dshi_0395	0.55	+0.6
385,449	-		Dshi_0395	0.57	+0.7
385,492	-		Dshi_0395	0.61	+0.1
385,492	-		Dshi_0395	0.61	+0.3
385,517	-		Dshi_0395	0.63	-0.3
385,555	+		Dshi_0395	0.66	-1.6
385,557	+		Dshi_0395	0.66	+0.5
385,565	-		Dshi_0395	0.67	+0.1
385,609	+		Dshi_0395	0.71	+1.2
385,609	+		Dshi_0395	0.71	+0.3
385,609	+		Dshi_0395	0.71	-0.6
385,617	-		Dshi_0395	0.71	+0.3
385,617	-		Dshi_0395	0.71	+1.4
385,617	-		Dshi_0395	0.71	+0.7
385,617	-		Dshi_0395	0.71	+1.6
385,623	-		Dshi_0395	0.72	-0.1
385,628	+		Dshi_0395	0.72	-0.4
385,730	-		Dshi_0395	0.81	-0.8