Experiment: rich media
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3459 and Dsui_3460 are separated by 1 nucleotides Dsui_3460 and Dsui_3461 are separated by 150 nucleotides Dsui_3461 and Dsui_3462 are separated by 335 nucleotides
Dsui_3459: Dsui_3459 - septum site-determining protein MinD, at 3,722,111 to 3,722,923
_3459
Dsui_3460: Dsui_3460 - cell division topological specificity factor MinE, at 3,722,925 to 3,723,191
_3460
Dsui_3461: Dsui_3461 - hypothetical protein, at 3,723,342 to 3,724,892
_3461
Dsui_3462: Dsui_3462 - ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component, at 3,725,228 to 3,726,214
_3462
Position (kb)
3723
3724
3725 Strain fitness (log2 ratio)
-1
0
1
2 at 3722.346 kb on + strand, within Dsui_3459 at 3722.444 kb on + strand, within Dsui_3459 at 3722.590 kb on + strand, within Dsui_3459 at 3722.649 kb on + strand, within Dsui_3459 at 3722.649 kb on - strand at 3722.691 kb on + strand, within Dsui_3459 at 3722.766 kb on + strand, within Dsui_3459 at 3722.861 kb on + strand at 3723.247 kb on + strand at 3723.459 kb on - strand at 3723.759 kb on + strand at 3723.831 kb on + strand, within Dsui_3461 at 3723.884 kb on + strand, within Dsui_3461 at 3723.908 kb on + strand at 3723.913 kb on + strand at 3723.921 kb on - strand, within Dsui_3461 at 3724.019 kb on - strand at 3724.093 kb on + strand at 3724.150 kb on + strand at 3724.150 kb on + strand at 3724.158 kb on - strand at 3724.306 kb on - strand at 3724.367 kb on + strand at 3724.409 kb on - strand at 3724.744 kb on + strand at 3724.800 kb on + strand at 3724.808 kb on - strand at 3725.027 kb on - strand at 3725.027 kb on - strand at 3725.095 kb on + strand at 3725.103 kb on - strand at 3725.154 kb on + strand at 3725.251 kb on - strand at 3725.313 kb on + strand at 3725.347 kb on + strand, within Dsui_3462 at 3725.397 kb on + strand, within Dsui_3462 at 3725.464 kb on - strand at 3725.503 kb on + strand, within Dsui_3462 at 3725.526 kb on - strand at 3725.526 kb on - strand, within Dsui_3462 at 3725.594 kb on - strand, within Dsui_3462 at 3725.624 kb on + strand, within Dsui_3462 at 3725.888 kb on + strand, within Dsui_3462
Per-strain Table
Position Strand Gene LocusTag Fraction rich media remove 3,722,346 + Dsui_3459 0.29 +0.5 3,722,444 + Dsui_3459 0.41 -0.4 3,722,590 + Dsui_3459 0.59 +0.5 3,722,649 + Dsui_3459 0.66 +0.2 3,722,649 - +1.7 3,722,691 + Dsui_3459 0.71 +1.2 3,722,766 + Dsui_3459 0.81 +0.2 3,722,861 + +0.1 3,723,247 + +1.0 3,723,459 - -0.4 3,723,759 + +1.7 3,723,831 + Dsui_3461 0.32 -0.3 3,723,884 + Dsui_3461 0.35 -0.9 3,723,908 + +0.3 3,723,913 + +2.3 3,723,921 - Dsui_3461 0.37 +0.9 3,724,019 - +0.3 3,724,093 + +0.3 3,724,150 + +1.3 3,724,150 + +1.3 3,724,158 - +0.7 3,724,306 - +0.7 3,724,367 + +1.3 3,724,409 - +0.3 3,724,744 + +0.3 3,724,800 + +1.3 3,724,808 - +2.3 3,725,027 - -0.3 3,725,027 - -0.2 3,725,095 + +2.3 3,725,103 - -0.3 3,725,154 + +1.5 3,725,251 - +1.7 3,725,313 + -0.5 3,725,347 + Dsui_3462 0.12 +0.3 3,725,397 + Dsui_3462 0.17 -0.5 3,725,464 - +0.3 3,725,503 + Dsui_3462 0.28 -0.5 3,725,526 - +0.7 3,725,526 - Dsui_3462 0.30 -0.3 3,725,594 - Dsui_3462 0.37 -0.3 3,725,624 + Dsui_3462 0.40 +0.7 3,725,888 + Dsui_3462 0.67 +0.2
Or see this region's nucleotide sequence