Experiment: rich media
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2642 and Dsui_2643 are separated by 14 nucleotides Dsui_2643 and Dsui_2644 are separated by 179 nucleotides Dsui_2644 and Dsui_2645 overlap by 4 nucleotides
Dsui_2642: Dsui_2642 - outer membrane protein, at 2,794,183 to 2,795,605
_2642
Dsui_2643: Dsui_2643 - hypothetical protein, at 2,795,620 to 2,795,895
_2643
Dsui_2644: Dsui_2644 - heavy metal response regulator, at 2,796,075 to 2,796,752
_2644
Dsui_2645: Dsui_2645 - heavy metal sensor kinase, at 2,796,749 to 2,798,149
_2645
Position (kb)
2796
2797 Strain fitness (log2 ratio)
-2
-1
0
1 at 2795.257 kb on - strand, within Dsui_2642 at 2795.393 kb on - strand, within Dsui_2642 at 2795.412 kb on - strand at 2795.618 kb on + strand at 2795.626 kb on - strand at 2795.640 kb on + strand at 2795.640 kb on + strand at 2795.797 kb on + strand at 2795.939 kb on - strand at 2795.968 kb on + strand at 2795.977 kb on + strand at 2796.126 kb on - strand at 2796.213 kb on - strand, within Dsui_2644 at 2796.234 kb on - strand at 2796.302 kb on + strand, within Dsui_2644 at 2796.302 kb on + strand, within Dsui_2644 at 2796.379 kb on - strand at 2796.407 kb on + strand, within Dsui_2644 at 2796.601 kb on + strand, within Dsui_2644 at 2796.616 kb on - strand, within Dsui_2644 at 2796.725 kb on + strand at 2796.728 kb on - strand at 2796.732 kb on + strand at 2796.831 kb on - strand at 2797.037 kb on + strand, within Dsui_2645 at 2797.171 kb on + strand, within Dsui_2645 at 2797.231 kb on + strand, within Dsui_2645 at 2797.231 kb on + strand, within Dsui_2645 at 2797.458 kb on - strand, within Dsui_2645 at 2797.575 kb on + strand, within Dsui_2645 at 2797.701 kb on + strand, within Dsui_2645
Per-strain Table
Position Strand Gene LocusTag Fraction rich media remove 2,795,257 - Dsui_2642 0.75 +0.2 2,795,393 - Dsui_2642 0.85 -0.4 2,795,412 - +0.2 2,795,618 + -0.2 2,795,626 - -0.8 2,795,640 + +0.7 2,795,640 + +1.5 2,795,797 + -0.1 2,795,939 - -0.1 2,795,968 + +1.7 2,795,977 + +1.5 2,796,126 - +0.4 2,796,213 - Dsui_2644 0.20 +0.5 2,796,234 - -0.5 2,796,302 + Dsui_2644 0.33 -0.7 2,796,302 + Dsui_2644 0.33 -1.7 2,796,379 - +0.9 2,796,407 + Dsui_2644 0.49 +0.7 2,796,601 + Dsui_2644 0.78 -0.9 2,796,616 - Dsui_2644 0.80 -0.1 2,796,725 + -2.6 2,796,728 - -0.1 2,796,732 + -0.0 2,796,831 - -0.3 2,797,037 + Dsui_2645 0.21 -0.3 2,797,171 + Dsui_2645 0.30 -0.0 2,797,231 + Dsui_2645 0.34 -0.4 2,797,231 + Dsui_2645 0.34 +0.4 2,797,458 - Dsui_2645 0.51 +0.7 2,797,575 + Dsui_2645 0.59 +0.1 2,797,701 + Dsui_2645 0.68 -0.5
Or see this region's nucleotide sequence