Experiment: rich media
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2598 and Dsui_2599 are separated by 729 nucleotides Dsui_2599 and Dsui_2600 are separated by 263 nucleotides Dsui_2600 and Dsui_2601 are separated by 371 nucleotides
Dsui_2598: Dsui_2598 - hypothetical protein, at 2,753,435 to 2,754,256
_2598
Dsui_2599: Dsui_2599 - hypothetical protein, at 2,754,986 to 2,755,663
_2599
Dsui_2600: Dsui_2600 - hypothetical protein, at 2,755,927 to 2,756,136
_2600
Dsui_2601: Dsui_2601 - hypothetical protein, at 2,756,508 to 2,756,870
_2601
Position (kb)
2754
2755
2756 Strain fitness (log2 ratio)
-2
-1
0
1 at 2754.094 kb on + strand, within Dsui_2598 at 2754.203 kb on - strand at 2754.215 kb on - strand at 2754.290 kb on + strand at 2754.293 kb on - strand at 2754.354 kb on + strand at 2754.440 kb on + strand at 2754.448 kb on - strand at 2754.502 kb on - strand at 2754.502 kb on - strand at 2754.572 kb on + strand at 2754.573 kb on - strand at 2754.573 kb on - strand at 2754.580 kb on - strand at 2754.590 kb on - strand at 2754.590 kb on - strand at 2754.648 kb on + strand at 2754.972 kb on + strand at 2755.121 kb on - strand, within Dsui_2599 at 2755.294 kb on + strand, within Dsui_2599 at 2755.504 kb on - strand, within Dsui_2599 at 2755.628 kb on + strand at 2755.695 kb on - strand at 2755.890 kb on + strand at 2755.890 kb on + strand at 2755.971 kb on + strand, within Dsui_2600 at 2755.979 kb on - strand, within Dsui_2600 at 2756.000 kb on - strand, within Dsui_2600 at 2756.008 kb on - strand, within Dsui_2600 at 2756.023 kb on + strand, within Dsui_2600 at 2756.070 kb on + strand at 2756.112 kb on + strand, within Dsui_2600 at 2756.112 kb on + strand, within Dsui_2600 at 2756.126 kb on - strand at 2756.265 kb on + strand at 2756.278 kb on + strand at 2756.323 kb on + strand at 2756.415 kb on - strand at 2756.430 kb on + strand at 2756.533 kb on + strand at 2756.583 kb on - strand, within Dsui_2601
Per-strain Table
Position Strand Gene LocusTag Fraction rich media remove 2,754,094 + Dsui_2598 0.80 -0.2 2,754,203 - -0.4 2,754,215 - -0.0 2,754,290 + -0.2 2,754,293 - -0.3 2,754,354 + -0.9 2,754,440 + -1.0 2,754,448 - -0.9 2,754,502 - +0.2 2,754,502 - -0.6 2,754,572 + +0.2 2,754,573 - -0.4 2,754,573 - -1.6 2,754,580 - -1.2 2,754,590 - -1.4 2,754,590 - -0.9 2,754,648 + +1.2 2,754,972 + -0.5 2,755,121 - Dsui_2599 0.20 -1.5 2,755,294 + Dsui_2599 0.45 -0.8 2,755,504 - Dsui_2599 0.76 -0.9 2,755,628 + -0.2 2,755,695 - -0.3 2,755,890 + -2.3 2,755,890 + -1.0 2,755,971 + Dsui_2600 0.21 -0.5 2,755,979 - Dsui_2600 0.25 -0.5 2,756,000 - Dsui_2600 0.35 -1.4 2,756,008 - Dsui_2600 0.39 +0.1 2,756,023 + Dsui_2600 0.46 -0.4 2,756,070 + +1.5 2,756,112 + Dsui_2600 0.88 +0.5 2,756,112 + Dsui_2600 0.88 -0.5 2,756,126 - -0.4 2,756,265 + -0.8 2,756,278 + -0.3 2,756,323 + -1.0 2,756,415 - +0.1 2,756,430 + +0.7 2,756,533 + +0.0 2,756,583 - Dsui_2601 0.21 -0.5
Or see this region's nucleotide sequence