Strain Fitness in Dechlorosoma suillum PS around Dsui_2481

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_2480 and Dsui_2481 overlap by 4 nucleotidesDsui_2481 and Dsui_2482 are separated by 71 nucleotidesDsui_2482 and Dsui_2483 overlap by 11 nucleotides Dsui_2480: Dsui_2480 - nitrous oxidase accessory protein, at 2,630,518 to 2,631,753 _2480 Dsui_2481: Dsui_2481 - DNA polymerase III, epsilon subunit, at 2,631,750 to 2,632,469 _2481 Dsui_2482: Dsui_2482 - ribonuclease HI, at 2,632,541 to 2,632,993 _2482 Dsui_2483: Dsui_2483 - methylase involved in ubiquinone/menaquinone biosynthesis, at 2,632,983 to 2,633,711 _2483 Position (kb) 2631 2632 2633Strain fitness (log2 ratio) -1 0 1 2at 2630.792 kb on + strand, within Dsui_2480at 2630.799 kb on - strand, within Dsui_2480at 2630.884 kb on + strandat 2631.108 kb on - strand, within Dsui_2480at 2631.293 kb on - strand, within Dsui_2480at 2631.381 kb on + strandat 2631.415 kb on + strand, within Dsui_2480at 2631.428 kb on - strand, within Dsui_2480at 2631.493 kb on - strand, within Dsui_2480at 2631.663 kb on + strandat 2631.734 kb on - strandat 2632.499 kb on - strandat 2632.524 kb on - strandat 2632.524 kb on - strandat 2632.545 kb on - strandat 2632.975 kb on - strandat 2632.998 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction rich media
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2,630,792 + Dsui_2480 0.22 +1.0
2,630,799 - Dsui_2480 0.23 +0.4
2,630,884 + +2.4
2,631,108 - Dsui_2480 0.48 +0.9
2,631,293 - Dsui_2480 0.63 -0.5
2,631,381 + +1.0
2,631,415 + Dsui_2480 0.73 -0.3
2,631,428 - Dsui_2480 0.74 +0.1
2,631,493 - Dsui_2480 0.79 +0.2
2,631,663 + +0.4
2,631,734 - -0.1
2,632,499 - +0.4
2,632,524 - +0.8
2,632,524 - -0.2
2,632,545 - +0.2
2,632,975 - -0.4
2,632,998 - +0.3

Or see this region's nucleotide sequence