Experiment: rich media
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1765 and Dsui_1766 overlap by 8 nucleotides Dsui_1766 and Dsui_1767 are separated by 94 nucleotides Dsui_1767 and Dsui_1768 are separated by 9 nucleotides Dsui_1768 and Dsui_1769 overlap by 4 nucleotides
Dsui_1765: Dsui_1765 - acetyltransferase, ribosomal protein N-acetylase, at 1,852,905 to 1,853,489
_1765
Dsui_1766: Dsui_1766 - hypothetical protein, at 1,853,482 to 1,853,910
_1766
Dsui_1767: Dsui_1767 - methyltransferase family protein, at 1,854,005 to 1,854,658
_1767
Dsui_1768: Dsui_1768 - WxcM-like protein, at 1,854,668 to 1,855,084
_1768
Dsui_1769: Dsui_1769 - putative PLP-dependent enzyme possibly involved in cell wall biogenesis, at 1,855,081 to 1,856,211
_1769
Position (kb)
1854
1855 Strain fitness (log2 ratio)
-1
0
1 at 1853.026 kb on - strand, within Dsui_1765 at 1853.069 kb on - strand, within Dsui_1765 at 1853.075 kb on - strand, within Dsui_1765 at 1853.123 kb on + strand, within Dsui_1765 at 1853.131 kb on - strand, within Dsui_1765 at 1853.248 kb on - strand, within Dsui_1765 at 1853.276 kb on + strand, within Dsui_1765 at 1853.286 kb on + strand, within Dsui_1765 at 1853.327 kb on - strand, within Dsui_1765 at 1853.332 kb on - strand, within Dsui_1765 at 1853.392 kb on + strand, within Dsui_1765 at 1853.521 kb on + strand at 1853.522 kb on - strand at 1853.544 kb on - strand, within Dsui_1766 at 1853.624 kb on + strand, within Dsui_1766 at 1853.866 kb on + strand, within Dsui_1766 at 1853.928 kb on + strand at 1853.932 kb on - strand at 1853.984 kb on + strand at 1854.001 kb on + strand at 1854.001 kb on + strand at 1854.050 kb on + strand at 1854.050 kb on + strand at 1854.106 kb on + strand, within Dsui_1767 at 1854.149 kb on + strand, within Dsui_1767 at 1854.247 kb on + strand, within Dsui_1767 at 1854.272 kb on + strand, within Dsui_1767 at 1854.437 kb on + strand, within Dsui_1767 at 1854.476 kb on + strand, within Dsui_1767 at 1854.557 kb on + strand, within Dsui_1767 at 1854.596 kb on + strand at 1854.650 kb on - strand at 1854.661 kb on - strand at 1854.670 kb on + strand at 1854.705 kb on + strand at 1854.721 kb on + strand, within Dsui_1768 at 1854.735 kb on - strand, within Dsui_1768 at 1854.818 kb on + strand, within Dsui_1768 at 1854.836 kb on + strand, within Dsui_1768 at 1854.837 kb on - strand, within Dsui_1768 at 1854.842 kb on - strand, within Dsui_1768 at 1854.891 kb on + strand, within Dsui_1768 at 1854.941 kb on - strand, within Dsui_1768 at 1854.989 kb on + strand, within Dsui_1768 at 1854.998 kb on + strand, within Dsui_1768 at 1855.006 kb on - strand, within Dsui_1768 at 1855.016 kb on - strand at 1855.056 kb on + strand at 1855.059 kb on - strand at 1855.064 kb on + strand at 1855.141 kb on + strand at 1855.167 kb on - strand at 1855.169 kb on + strand at 1855.188 kb on + strand at 1855.238 kb on + strand, within Dsui_1769 at 1855.238 kb on + strand, within Dsui_1769 at 1855.243 kb on + strand, within Dsui_1769 at 1855.243 kb on + strand, within Dsui_1769 at 1855.243 kb on + strand, within Dsui_1769 at 1855.246 kb on - strand, within Dsui_1769 at 1855.246 kb on - strand, within Dsui_1769 at 1855.383 kb on + strand, within Dsui_1769
Per-strain Table
Position Strand Gene LocusTag Fraction rich media remove 1,853,026 - Dsui_1765 0.21 +0.0 1,853,069 - Dsui_1765 0.28 -0.1 1,853,075 - Dsui_1765 0.29 +1.0 1,853,123 + Dsui_1765 0.37 -0.4 1,853,131 - Dsui_1765 0.39 -0.4 1,853,248 - Dsui_1765 0.59 -0.2 1,853,276 + Dsui_1765 0.63 -0.9 1,853,286 + Dsui_1765 0.65 -0.2 1,853,327 - Dsui_1765 0.72 -1.2 1,853,332 - Dsui_1765 0.73 -1.0 1,853,392 + Dsui_1765 0.83 -0.8 1,853,521 + -0.4 1,853,522 - +0.0 1,853,544 - Dsui_1766 0.14 -0.1 1,853,624 + Dsui_1766 0.33 -0.4 1,853,866 + Dsui_1766 0.90 +0.0 1,853,928 + -0.1 1,853,932 - +0.7 1,853,984 + -0.6 1,854,001 + -0.3 1,854,001 + -0.0 1,854,050 + -0.2 1,854,050 + -0.7 1,854,106 + Dsui_1767 0.15 +0.2 1,854,149 + Dsui_1767 0.22 -0.5 1,854,247 + Dsui_1767 0.37 -0.3 1,854,272 + Dsui_1767 0.41 -0.3 1,854,437 + Dsui_1767 0.66 -0.2 1,854,476 + Dsui_1767 0.72 -0.3 1,854,557 + Dsui_1767 0.84 -0.5 1,854,596 + -0.3 1,854,650 - -1.1 1,854,661 - -0.8 1,854,670 + +0.1 1,854,705 + -0.7 1,854,721 + Dsui_1768 0.13 -0.3 1,854,735 - Dsui_1768 0.16 -0.0 1,854,818 + Dsui_1768 0.36 -0.0 1,854,836 + Dsui_1768 0.40 -0.3 1,854,837 - Dsui_1768 0.41 +0.7 1,854,842 - Dsui_1768 0.42 +0.5 1,854,891 + Dsui_1768 0.53 -0.6 1,854,941 - Dsui_1768 0.65 -0.8 1,854,989 + Dsui_1768 0.77 -0.3 1,854,998 + Dsui_1768 0.79 +0.1 1,855,006 - Dsui_1768 0.81 -0.8 1,855,016 - +0.3 1,855,056 + -0.6 1,855,059 - -0.6 1,855,064 + +0.1 1,855,141 + -1.0 1,855,167 - -0.6 1,855,169 + -0.4 1,855,188 + -0.7 1,855,238 + Dsui_1769 0.14 -0.3 1,855,238 + Dsui_1769 0.14 -0.4 1,855,243 + Dsui_1769 0.14 -0.2 1,855,243 + Dsui_1769 0.14 -0.4 1,855,243 + Dsui_1769 0.14 -0.1 1,855,246 - Dsui_1769 0.15 -0.0 1,855,246 - Dsui_1769 0.15 +0.3 1,855,383 + Dsui_1769 0.27 -0.6
Or see this region's nucleotide sequence