Strain Fitness in Dechlorosoma suillum PS around Dsui_1258

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_1257 and Dsui_1258 are separated by 38 nucleotidesDsui_1258 and Dsui_1259 are separated by 120 nucleotidesDsui_1259 and Dsui_1260 are separated by 71 nucleotides Dsui_1257: Dsui_1257 - DNA-directed DNA polymerase III PolC, at 1,318,586 to 1,322,041 _1257 Dsui_1258: Dsui_1258 - transcriptional regulator, at 1,322,080 to 1,322,991 _1258 Dsui_1259: Dsui_1259 - Pirin-related protein, at 1,323,112 to 1,323,822 _1259 Dsui_1260: Dsui_1260 - multimeric flavodoxin WrbA, at 1,323,894 to 1,324,469 _1260 Position (kb) 1322 1323Strain fitness (log2 ratio) -1 0 1 2 3at 1322.188 kb on - strand, within Dsui_1258at 1322.338 kb on + strand, within Dsui_1258at 1322.387 kb on + strand, within Dsui_1258at 1322.401 kb on - strand, within Dsui_1258at 1322.413 kb on - strand, within Dsui_1258at 1322.495 kb on - strand, within Dsui_1258at 1322.495 kb on - strand, within Dsui_1258at 1322.637 kb on - strand, within Dsui_1258at 1322.663 kb on + strandat 1322.663 kb on + strand, within Dsui_1258at 1322.671 kb on - strand, within Dsui_1258at 1322.684 kb on - strand, within Dsui_1258at 1322.702 kb on + strand, within Dsui_1258at 1322.707 kb on - strand, within Dsui_1258at 1322.717 kb on - strand, within Dsui_1258at 1322.786 kb on + strandat 1322.847 kb on + strandat 1322.855 kb on - strand, within Dsui_1258at 1322.865 kb on - strand, within Dsui_1258at 1322.890 kb on - strand, within Dsui_1258at 1323.051 kb on + strandat 1323.127 kb on - strandat 1323.251 kb on + strandat 1323.251 kb on + strandat 1323.420 kb on + strandat 1323.516 kb on + strandat 1323.655 kb on - strandat 1323.816 kb on + strandat 1323.823 kb on + strandat 1323.833 kb on - strandat 1323.875 kb on - strandat 1323.887 kb on - strandat 1323.937 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction rich media
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1,322,188 - Dsui_1258 0.12 +0.5
1,322,338 + Dsui_1258 0.28 +0.4
1,322,387 + Dsui_1258 0.34 +0.7
1,322,401 - Dsui_1258 0.35 +0.7
1,322,413 - Dsui_1258 0.37 -0.2
1,322,495 - Dsui_1258 0.46 +0.1
1,322,495 - Dsui_1258 0.46 +1.8
1,322,637 - Dsui_1258 0.61 -0.3
1,322,663 + -0.5
1,322,663 + Dsui_1258 0.64 +0.0
1,322,671 - Dsui_1258 0.65 -0.1
1,322,684 - Dsui_1258 0.66 +1.0
1,322,702 + Dsui_1258 0.68 +0.6
1,322,707 - Dsui_1258 0.69 +0.1
1,322,717 - Dsui_1258 0.70 +1.8
1,322,786 + +3.1
1,322,847 + +1.4
1,322,855 - Dsui_1258 0.85 -0.7
1,322,865 - Dsui_1258 0.86 +0.3
1,322,890 - Dsui_1258 0.89 +1.0
1,323,051 + -1.3
1,323,127 - +1.4
1,323,251 + +1.0
1,323,251 + +1.4
1,323,420 + +0.4
1,323,516 + +0.8
1,323,655 - +2.6
1,323,816 + +0.5
1,323,823 + -0.3
1,323,833 - +1.0
1,323,875 - +1.8
1,323,887 - +2.4
1,323,937 + -0.1

Or see this region's nucleotide sequence