Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2710 and DvMF_2711 are separated by 215 nucleotides DvMF_2711 and DvMF_2712 are separated by 9 nucleotides DvMF_2712 and DvMF_2713 are separated by 171 nucleotides
DvMF_2710: DvMF_2710 - methyl-accepting chemotaxis sensory transducer (RefSeq), at 3,430,110 to 3,431,855
_2710
DvMF_2711: DvMF_2711 - cytochrome c family protein (RefSeq), at 3,432,071 to 3,432,541
_2711
DvMF_2712: DvMF_2712 - methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor (RefSeq), at 3,432,551 to 3,434,572
_2712
DvMF_2713: DvMF_2713 - 4Fe-4S ferredoxin iron-sulfur binding domain protein (RefSeq), at 3,434,744 to 3,436,714
_2713
Position (kb)
3432
3433
3434
3435 Strain fitness (log2 ratio)
-1
0
1 at 3431.849 kb on + strand at 3431.857 kb on - strand at 3432.116 kb on - strand at 3432.169 kb on - strand, within DvMF_2711 at 3432.304 kb on - strand, within DvMF_2711 at 3432.339 kb on - strand, within DvMF_2711 at 3432.608 kb on + strand at 3432.790 kb on + strand, within DvMF_2712 at 3432.892 kb on - strand, within DvMF_2712 at 3433.192 kb on + strand, within DvMF_2712 at 3433.243 kb on + strand, within DvMF_2712 at 3433.532 kb on - strand, within DvMF_2712 at 3433.561 kb on + strand, within DvMF_2712 at 3433.604 kb on + strand, within DvMF_2712 at 3433.954 kb on - strand, within DvMF_2712 at 3434.228 kb on + strand, within DvMF_2712 at 3434.345 kb on - strand, within DvMF_2712 at 3434.364 kb on + strand, within DvMF_2712 at 3434.453 kb on - strand at 3434.581 kb on + strand at 3435.007 kb on - strand, within DvMF_2713 at 3435.040 kb on - strand, within DvMF_2713 at 3435.126 kb on + strand, within DvMF_2713
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 3,431,849 + -0.4 3,431,857 - +0.4 3,432,116 - +0.3 3,432,169 - DvMF_2711 0.21 -0.3 3,432,304 - DvMF_2711 0.49 -0.5 3,432,339 - DvMF_2711 0.57 +1.0 3,432,608 + -0.2 3,432,790 + DvMF_2712 0.12 -0.1 3,432,892 - DvMF_2712 0.17 -0.5 3,433,192 + DvMF_2712 0.32 +0.8 3,433,243 + DvMF_2712 0.34 +0.1 3,433,532 - DvMF_2712 0.49 -0.0 3,433,561 + DvMF_2712 0.50 +0.1 3,433,604 + DvMF_2712 0.52 +0.1 3,433,954 - DvMF_2712 0.69 +0.8 3,434,228 + DvMF_2712 0.83 -0.4 3,434,345 - DvMF_2712 0.89 -0.4 3,434,364 + DvMF_2712 0.90 -0.2 3,434,453 - -0.4 3,434,581 + +0.3 3,435,007 - DvMF_2713 0.13 -0.4 3,435,040 - DvMF_2713 0.15 +0.0 3,435,126 + DvMF_2713 0.19 -0.1
Or see this region's nucleotide sequence