Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2490 and DvMF_2491 are separated by 130 nucleotides DvMF_2491 and DvMF_2492 are separated by 95 nucleotides DvMF_2492 and DvMF_2493 are separated by 36 nucleotides DvMF_2493 and DvMF_2494 are separated by 37 nucleotides
DvMF_2490: DvMF_2490 - Polyprenyl synthetase (RefSeq), at 3,144,234 to 3,145,229
_2490
DvMF_2491: DvMF_2491 - purine or other phosphorylase family 1 (RefSeq), at 3,145,360 to 3,146,079
_2491
DvMF_2492: DvMF_2492 - hypothetical protein (RefSeq), at 3,146,175 to 3,146,324
_2492
DvMF_2493: DvMF_2493 - hypothetical protein (RefSeq), at 3,146,361 to 3,146,591
_2493
DvMF_2494: DvMF_2494 - nucleotide sugar dehydrogenase (RefSeq), at 3,146,629 to 3,147,945
_2494
Position (kb)
3146
3147 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3145.261 kb on + strand at 3145.293 kb on - strand at 3145.305 kb on + strand at 3145.384 kb on - strand at 3146.172 kb on - strand at 3146.223 kb on + strand, within DvMF_2492 at 3146.626 kb on + strand at 3146.941 kb on - strand, within DvMF_2494 at 3146.985 kb on + strand, within DvMF_2494
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 3,145,261 + -0.1 3,145,293 - -0.3 3,145,305 + -0.1 3,145,384 - -1.0 3,146,172 - -0.2 3,146,223 + DvMF_2492 0.32 -0.7 3,146,626 + -0.4 3,146,941 - DvMF_2494 0.24 -1.1 3,146,985 + DvMF_2494 0.27 -3.1
Or see this region's nucleotide sequence