Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2325 and DvMF_2326 are separated by 288 nucleotides DvMF_2326 and DvMF_2327 are separated by 211 nucleotides
DvMF_2325: DvMF_2325 - ectoine/hydroxyectoine ABC transporter solute-binding protein (RefSeq), at 2,929,640 to 2,930,539
_2325
DvMF_2326: DvMF_2326 - TPR repeat-containing protein (RefSeq), at 2,930,828 to 2,931,592
_2326
DvMF_2327: DvMF_2327 - pyridine nucleotide-disulfide oxidoreductase family protein (RefSeq), at 2,931,804 to 2,933,087
_2327
Position (kb)
2930
2931
2932 Strain fitness (log2 ratio)
-1
0
1 at 2929.916 kb on + strand, within DvMF_2325 at 2929.939 kb on + strand, within DvMF_2325 at 2929.947 kb on - strand, within DvMF_2325 at 2930.009 kb on - strand, within DvMF_2325 at 2930.068 kb on + strand, within DvMF_2325 at 2930.076 kb on - strand, within DvMF_2325 at 2930.284 kb on - strand, within DvMF_2325 at 2930.489 kb on - strand at 2930.612 kb on - strand at 2930.705 kb on + strand at 2930.713 kb on - strand at 2931.200 kb on + strand, within DvMF_2326 at 2931.503 kb on + strand, within DvMF_2326 at 2931.582 kb on + strand at 2931.590 kb on - strand at 2931.612 kb on + strand at 2931.620 kb on - strand at 2931.690 kb on + strand at 2931.768 kb on + strand at 2931.773 kb on + strand at 2931.788 kb on + strand at 2932.090 kb on - strand, within DvMF_2327 at 2932.094 kb on + strand, within DvMF_2327 at 2932.134 kb on + strand, within DvMF_2327 at 2932.139 kb on + strand, within DvMF_2327 at 2932.183 kb on + strand, within DvMF_2327 at 2932.191 kb on - strand, within DvMF_2327 at 2932.256 kb on - strand, within DvMF_2327 at 2932.345 kb on + strand, within DvMF_2327 at 2932.390 kb on + strand, within DvMF_2327 at 2932.543 kb on + strand, within DvMF_2327 at 2932.571 kb on - strand, within DvMF_2327
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 2,929,916 + DvMF_2325 0.31 -0.7 2,929,939 + DvMF_2325 0.33 -0.5 2,929,947 - DvMF_2325 0.34 -0.3 2,930,009 - DvMF_2325 0.41 -0.5 2,930,068 + DvMF_2325 0.48 -0.3 2,930,076 - DvMF_2325 0.48 -0.3 2,930,284 - DvMF_2325 0.72 -0.3 2,930,489 - -0.2 2,930,612 - -0.6 2,930,705 + -0.3 2,930,713 - +0.0 2,931,200 + DvMF_2326 0.49 -0.6 2,931,503 + DvMF_2326 0.88 -0.5 2,931,582 + -0.3 2,931,590 - -0.5 2,931,612 + -0.5 2,931,620 - +0.0 2,931,690 + -0.5 2,931,768 + -0.1 2,931,773 + -0.7 2,931,788 + -0.6 2,932,090 - DvMF_2327 0.22 -0.5 2,932,094 + DvMF_2327 0.23 -0.7 2,932,134 + DvMF_2327 0.26 -0.2 2,932,139 + DvMF_2327 0.26 -0.2 2,932,183 + DvMF_2327 0.30 -0.6 2,932,191 - DvMF_2327 0.30 -0.6 2,932,256 - DvMF_2327 0.35 -0.7 2,932,345 + DvMF_2327 0.42 -0.4 2,932,390 + DvMF_2327 0.46 -0.9 2,932,543 + DvMF_2327 0.58 -1.2 2,932,571 - DvMF_2327 0.60 -0.1
Or see this region's nucleotide sequence