Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1301 and DvMF_1302 are separated by 541 nucleotides DvMF_1302 and DvMF_1303 overlap by 23 nucleotides DvMF_1303 and DvMF_1304 are separated by 0 nucleotides DvMF_1304 and DvMF_1305 overlap by 4 nucleotides
DvMF_1301: DvMF_1301 - baseplate assembly protein, putative (RefSeq), at 1,590,736 to 1,591,461
_1301
DvMF_1302: DvMF_1302 - baseplate assembly protein, putative (RefSeq), at 1,592,003 to 1,592,437
_1302
DvMF_1303: DvMF_1303 - baseplate assembly protein, putative (RefSeq), at 1,592,415 to 1,593,587
_1303
DvMF_1304: DvMF_1304 - hypothetical protein (RefSeq), at 1,593,588 to 1,594,259
_1304
DvMF_1305: DvMF_1305 - tail fiber protein, putative (RefSeq), at 1,594,256 to 1,595,773
_1305
Position (kb)
1592
1593
1594 Strain fitness (log2 ratio)
-1
0
1 at 1591.571 kb on - strand at 1592.161 kb on + strand, within DvMF_1302 at 1592.203 kb on + strand, within DvMF_1302 at 1592.261 kb on - strand, within DvMF_1302 at 1592.302 kb on - strand, within DvMF_1302 at 1592.318 kb on + strand, within DvMF_1302 at 1592.375 kb on - strand, within DvMF_1302 at 1592.453 kb on - strand at 1592.474 kb on + strand at 1592.492 kb on - strand at 1592.515 kb on - strand at 1592.727 kb on - strand, within DvMF_1303 at 1593.090 kb on + strand, within DvMF_1303 at 1593.132 kb on - strand, within DvMF_1303 at 1593.147 kb on - strand, within DvMF_1303 at 1593.346 kb on + strand, within DvMF_1303 at 1593.383 kb on + strand, within DvMF_1303 at 1593.383 kb on + strand, within DvMF_1303 at 1593.391 kb on - strand, within DvMF_1303 at 1593.391 kb on - strand, within DvMF_1303 at 1593.391 kb on - strand, within DvMF_1303 at 1593.391 kb on - strand, within DvMF_1303 at 1593.526 kb on + strand at 1593.548 kb on - strand at 1593.892 kb on + strand, within DvMF_1304 at 1593.954 kb on - strand, within DvMF_1304 at 1594.239 kb on - strand at 1594.466 kb on + strand, within DvMF_1305 at 1594.568 kb on - strand, within DvMF_1305
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 1,591,571 - +0.3 1,592,161 + DvMF_1302 0.36 +0.1 1,592,203 + DvMF_1302 0.46 -0.2 1,592,261 - DvMF_1302 0.59 +0.2 1,592,302 - DvMF_1302 0.69 +0.6 1,592,318 + DvMF_1302 0.72 +0.1 1,592,375 - DvMF_1302 0.86 -0.1 1,592,453 - +0.1 1,592,474 + -0.2 1,592,492 - +0.4 1,592,515 - -0.0 1,592,727 - DvMF_1303 0.27 +0.1 1,593,090 + DvMF_1303 0.58 +0.3 1,593,132 - DvMF_1303 0.61 -0.0 1,593,147 - DvMF_1303 0.62 -0.0 1,593,346 + DvMF_1303 0.79 +0.0 1,593,383 + DvMF_1303 0.83 -0.3 1,593,383 + DvMF_1303 0.83 -0.0 1,593,391 - DvMF_1303 0.83 +0.4 1,593,391 - DvMF_1303 0.83 +0.0 1,593,391 - DvMF_1303 0.83 +0.1 1,593,391 - DvMF_1303 0.83 -0.1 1,593,526 + +0.4 1,593,548 - +0.2 1,593,892 + DvMF_1304 0.45 +0.2 1,593,954 - DvMF_1304 0.54 +0.1 1,594,239 - -0.5 1,594,466 + DvMF_1305 0.14 +0.2 1,594,568 - DvMF_1305 0.21 -0.0
Or see this region's nucleotide sequence