Strain Fitness in Shewanella oneidensis MR-1 around SO2958

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,094,082	-				+0.0
3,094,166	+		SO2956	0.22	+0.9
3,094,166	+		SO2956	0.22	-0.4
3,094,183	+		SO2956	0.25	-0.4
3,094,340	-		SO2956	0.58	-0.1
3,094,340	-		SO2956	0.58	-0.5
3,094,340	-		SO2956	0.58	+0.9
3,094,376	-		SO2956	0.66	+0.2
3,094,401	-		SO2956	0.71	-0.1
3,094,510	-				-0.1
3,094,510	-				+0.0
3,094,593	-				-0.1
3,094,757	-		SO2957	0.34	-0.0
3,094,759	+		SO2957	0.35	-0.4
3,094,865	+		SO2957	0.63	+0.2
3,094,875	+		SO2957	0.66	+0.2
3,094,875	+		SO2957	0.66	-0.3
3,094,883	-		SO2957	0.68	+0.1
3,094,883	-		SO2957	0.68	+0.3
3,094,900	-		SO2957	0.73	-1.5
3,094,954	+		SO2957	0.88	+0.3
3,094,954	+		SO2957	0.88	-0.0
3,094,962	-		SO2957	0.90	-0.5
3,095,220	-		SO2958	0.48	-0.1
3,095,296	-		SO2958	0.65	-0.7
3,095,358	+		SO2958	0.78	-0.9
3,095,393	-		SO2958	0.86	-0.8
3,095,393	-		SO2958	0.86	-0.6
3,095,502	-		SO2959	0.18	-0.3
3,095,502	-		SO2959	0.18	-0.1
3,095,558	+		SO2959	0.41	-0.4
3,095,566	-		SO2959	0.45	+1.5
3,095,669	-		SO2959	0.88	-0.3
3,095,751	-		SO2960	0.14	+0.3
3,095,852	-		SO2960	0.42	-0.8
3,095,916	+		SO2960	0.60	-0.1
3,095,916	+		SO2960	0.60	-0.3
3,095,916	+		SO2960	0.60	-1.0
3,095,918	-		SO2960	0.60	-0.2
3,095,923	+		SO2960	0.62	-0.7
3,095,924	-		SO2960	0.62	+1.6
3,095,960	+		SO2960	0.72	-0.5
3,095,967	-		SO2960	0.74	-0.5
3,095,968	-		SO2960	0.74	-0.1
3,096,056	-				-0.2
3,096,067	-				-0.4
3,096,336	+				-0.6
3,096,364	+				-0.6
3,096,385	-				+1.1
3,096,413	+		SO2962	0.12	-0.2
3,096,421	-		SO2962	0.15	-0.5