Strain Fitness in Shewanella oneidensis MR-1 around SO1871

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,962,941	+	speA	SO1870	0.60	-0.2
1,962,954	-	speA	SO1870	0.61	+0.0
1,963,058	+	speA	SO1870	0.66	+0.2
1,963,107	+	speA	SO1870	0.68	+0.2
1,963,373	+	speA	SO1870	0.82	+0.1
1,963,673	+				-0.4
1,963,732	+				-0.1
1,963,812	+				-1.3
1,963,822	+				-0.6
1,963,830	-				+0.1
1,963,830	-				+0.3
1,963,892	+				-0.1
1,964,375	+		SO1871	0.49	-0.4
1,964,421	+		SO1871	0.54	+1.4
1,964,462	+		SO1871	0.59	-0.4
1,964,470	-		SO1871	0.59	+0.0
1,964,478	+		SO1871	0.60	+0.3
1,964,510	+		SO1871	0.64	-0.5
1,964,510	+		SO1871	0.64	+0.0
1,964,510	+		SO1871	0.64	-0.2
1,964,518	-		SO1871	0.65	+0.0
1,964,518	-		SO1871	0.65	-1.0
1,964,568	+		SO1871	0.70	-0.1
1,964,596	+		SO1871	0.73	+0.0
1,964,596	-		SO1871	0.73	-0.4
1,964,605	+		SO1871	0.74	+0.3
1,964,643	+		SO1871	0.78	+0.5
1,964,726	-		SO1871	0.87	-0.2
1,964,750	+		SO1871	0.89	-0.1
1,964,771	+				-0.1
1,964,771	+				+0.3
1,964,776	+				+0.5
1,964,984	+				+0.1
1,964,992	-				-0.1
1,965,054	-				+0.9
1,965,526	-				+1.1
1,965,619	+				+1.1
1,965,735	+				-0.9