Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_3146 and DvMF_3147 are separated by 273 nucleotides DvMF_3147 and DvMF_3148 are separated by 148 nucleotides DvMF_3148 and DvMF_3149 are separated by 92 nucleotides
DvMF_3146: DvMF_3146 - extracellular solute-binding protein family 3 (RefSeq), at 3,969,273 to 3,970,139
_3146
DvMF_3147: DvMF_3147 - alpha-glucan phosphorylase (RefSeq), at 3,970,413 to 3,972,983
_3147
DvMF_3148: DvMF_3148 - deoxyuridine 5'-triphosphate nucleotidohydrolase Dut (RefSeq), at 3,973,132 to 3,973,641
_3148
DvMF_3149: DvMF_3149 - acetylornithine aminotransferase (RefSeq), at 3,973,734 to 3,974,942
_3149
Position (kb)
3970
3971
3972
3973 Strain fitness (log2 ratio)
-1
0
1 at 3969.494 kb on + strand, within DvMF_3146 at 3969.703 kb on + strand, within DvMF_3146 at 3969.857 kb on + strand, within DvMF_3146 at 3970.032 kb on - strand, within DvMF_3146 at 3970.101 kb on + strand at 3970.130 kb on + strand at 3970.177 kb on - strand at 3970.182 kb on - strand at 3970.187 kb on - strand at 3970.650 kb on - strand at 3970.671 kb on + strand, within DvMF_3147 at 3970.880 kb on - strand, within DvMF_3147 at 3970.880 kb on - strand, within DvMF_3147 at 3970.950 kb on + strand, within DvMF_3147 at 3971.304 kb on + strand, within DvMF_3147 at 3971.390 kb on - strand, within DvMF_3147 at 3971.458 kb on - strand, within DvMF_3147 at 3971.459 kb on - strand, within DvMF_3147 at 3971.499 kb on + strand, within DvMF_3147 at 3971.499 kb on + strand, within DvMF_3147 at 3971.755 kb on + strand, within DvMF_3147 at 3971.755 kb on + strand, within DvMF_3147 at 3971.763 kb on - strand, within DvMF_3147 at 3971.810 kb on + strand, within DvMF_3147 at 3971.833 kb on + strand, within DvMF_3147 at 3972.180 kb on - strand, within DvMF_3147 at 3972.269 kb on + strand, within DvMF_3147 at 3972.340 kb on - strand, within DvMF_3147 at 3972.632 kb on - strand, within DvMF_3147 at 3972.782 kb on + strand at 3972.782 kb on + strand at 3972.937 kb on + strand at 3973.408 kb on - strand, within DvMF_3148
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 3,969,494 + DvMF_3146 0.25 -0.3 3,969,703 + DvMF_3146 0.50 -0.3 3,969,857 + DvMF_3146 0.67 -0.4 3,970,032 - DvMF_3146 0.88 -0.2 3,970,101 + -0.6 3,970,130 + -0.4 3,970,177 - +0.3 3,970,182 - -0.4 3,970,187 - -0.6 3,970,650 - -1.0 3,970,671 + DvMF_3147 0.10 +0.2 3,970,880 - DvMF_3147 0.18 -0.3 3,970,880 - DvMF_3147 0.18 -0.5 3,970,950 + DvMF_3147 0.21 -0.3 3,971,304 + DvMF_3147 0.35 -1.1 3,971,390 - DvMF_3147 0.38 -0.3 3,971,458 - DvMF_3147 0.41 +0.2 3,971,459 - DvMF_3147 0.41 -0.6 3,971,499 + DvMF_3147 0.42 -0.4 3,971,499 + DvMF_3147 0.42 -0.1 3,971,755 + DvMF_3147 0.52 -0.1 3,971,755 + DvMF_3147 0.52 -0.3 3,971,763 - DvMF_3147 0.53 -1.4 3,971,810 + DvMF_3147 0.54 +0.2 3,971,833 + DvMF_3147 0.55 +0.2 3,972,180 - DvMF_3147 0.69 -0.4 3,972,269 + DvMF_3147 0.72 -0.4 3,972,340 - DvMF_3147 0.75 -0.6 3,972,632 - DvMF_3147 0.86 -0.6 3,972,782 + -1.0 3,972,782 + +0.5 3,972,937 + -0.1 3,973,408 - DvMF_3148 0.54 -0.9
Or see this region's nucleotide sequence