Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2647 and DvMF_2648 are separated by 272 nucleotides DvMF_2648 and DvMF_2649 are separated by 9 nucleotides DvMF_2649 and DvMF_2650 are separated by 178 nucleotides DvMF_2650 and DvMF_2651 are separated by 57 nucleotides
DvMF_2647: DvMF_2647 - protein of unknown function DUF343 (RefSeq), at 3,349,861 to 3,350,061
_2647
DvMF_2648: DvMF_2648 - heat shock protein Hsp20 (RefSeq), at 3,350,334 to 3,350,747
_2648
DvMF_2649: DvMF_2649 - heat shock protein Hsp20 (RefSeq), at 3,350,757 to 3,351,314
_2649
DvMF_2650: DvMF_2650 - phosphodiesterase (RefSeq), at 3,351,493 to 3,352,041
_2650
DvMF_2651: DvMF_2651 - dihydrouridine synthase DuS (RefSeq), at 3,352,099 to 3,353,250
_2651
Position (kb)
3350
3351
3352 Strain fitness (log2 ratio)
-1
0
1 at 3349.791 kb on - strand at 3349.846 kb on + strand at 3350.054 kb on - strand at 3350.140 kb on + strand at 3350.186 kb on + strand at 3350.261 kb on + strand at 3350.505 kb on - strand, within DvMF_2648 at 3351.132 kb on - strand, within DvMF_2649 at 3351.397 kb on - strand at 3351.432 kb on + strand at 3351.720 kb on + strand, within DvMF_2650 at 3351.726 kb on - strand, within DvMF_2650 at 3352.268 kb on - strand, within DvMF_2651
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 3,349,791 - -0.7 3,349,846 + -0.6 3,350,054 - -1.2 3,350,140 + -0.8 3,350,186 + -0.1 3,350,261 + -0.5 3,350,505 - DvMF_2648 0.41 -0.3 3,351,132 - DvMF_2649 0.67 -0.1 3,351,397 - -0.5 3,351,432 + -0.1 3,351,720 + DvMF_2650 0.41 -0.0 3,351,726 - DvMF_2650 0.42 +0.3 3,352,268 - DvMF_2651 0.15 -0.3
Or see this region's nucleotide sequence