Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2595

Experiment: rich MoYLS4

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDvMF_2593 and DvMF_2594 are separated by 56 nucleotidesDvMF_2594 and DvMF_2595 are separated by 140 nucleotidesDvMF_2595 and DvMF_2596 are separated by 19 nucleotides DvMF_2593: DvMF_2593 - protein of unknown function DUF224 cysteine-rich region domain protein (RefSeq), at 3,276,808 to 3,278,199 _2593 DvMF_2594: DvMF_2594 - hmc operon protein 5 (RefSeq), at 3,278,256 to 3,278,936 _2594 DvMF_2595: DvMF_2595 - hmc operon protein 4 (RefSeq), at 3,279,077 to 3,279,214 _2595 DvMF_2596: DvMF_2596 - Polysulphide reductase NrfD (RefSeq), at 3,279,234 to 3,280,400 _2596 Position (kb) 3279 3280Strain fitness (log2 ratio) -1 0 1at 3278.208 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction rich MoYLS4
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3,278,208 + -0.6

Or see this region's nucleotide sequence