Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2573 and DvMF_2574 overlap by 4 nucleotides DvMF_2574 and DvMF_2575 are separated by 351 nucleotides DvMF_2575 and DvMF_2576 are separated by 21 nucleotides
DvMF_2573: DvMF_2573 - PAS/PAC sensor signal transduction histidine kinase (RefSeq), at 3,252,637 to 3,254,838
_2573
DvMF_2574: DvMF_2574 - Osmosensitive K channel His kinase sensor (RefSeq), at 3,254,835 to 3,255,962
_2574
DvMF_2575: DvMF_2575 - potassium-transporting ATPase, C subunit (RefSeq), at 3,256,314 to 3,256,907
_2575
DvMF_2576: DvMF_2576 - K+-transporting ATPase, B subunit (RefSeq), at 3,256,929 to 3,259,025
_2576
Position (kb)
3254
3255
3256 Strain fitness (log2 ratio)
-1
0
1 at 3253.870 kb on - strand, within DvMF_2573 at 3254.612 kb on - strand, within DvMF_2573 at 3254.718 kb on + strand at 3254.828 kb on - strand at 3254.873 kb on + strand at 3255.022 kb on - strand, within DvMF_2574 at 3255.355 kb on - strand, within DvMF_2574 at 3255.392 kb on - strand, within DvMF_2574 at 3255.461 kb on + strand, within DvMF_2574 at 3255.721 kb on - strand, within DvMF_2574 at 3255.761 kb on + strand, within DvMF_2574 at 3255.761 kb on + strand, within DvMF_2574 at 3255.761 kb on + strand, within DvMF_2574 at 3255.846 kb on - strand, within DvMF_2574 at 3255.904 kb on + strand at 3255.966 kb on + strand at 3256.039 kb on + strand at 3256.202 kb on + strand at 3256.745 kb on + strand, within DvMF_2575 at 3256.809 kb on + strand, within DvMF_2575 at 3256.822 kb on + strand, within DvMF_2575 at 3256.830 kb on - strand, within DvMF_2575 at 3256.859 kb on - strand at 3256.916 kb on + strand at 3256.937 kb on + strand at 3256.948 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 3,253,870 - DvMF_2573 0.56 -0.7 3,254,612 - DvMF_2573 0.90 +0.2 3,254,718 + -1.0 3,254,828 - -1.0 3,254,873 + -0.4 3,255,022 - DvMF_2574 0.17 -0.4 3,255,355 - DvMF_2574 0.46 -0.1 3,255,392 - DvMF_2574 0.49 -0.4 3,255,461 + DvMF_2574 0.55 -0.4 3,255,721 - DvMF_2574 0.79 +0.1 3,255,761 + DvMF_2574 0.82 -0.4 3,255,761 + DvMF_2574 0.82 -0.3 3,255,761 + DvMF_2574 0.82 -0.1 3,255,846 - DvMF_2574 0.90 -0.4 3,255,904 + -0.6 3,255,966 + -0.4 3,256,039 + -0.3 3,256,202 + -0.1 3,256,745 + DvMF_2575 0.73 -0.4 3,256,809 + DvMF_2575 0.83 +0.1 3,256,822 + DvMF_2575 0.86 -0.4 3,256,830 - DvMF_2575 0.87 -0.9 3,256,859 - -0.3 3,256,916 + -0.4 3,256,937 + -0.3 3,256,948 + +0.1
Or see this region's nucleotide sequence