Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2490

Experiment: rich MoYLS4

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDvMF_2489 and DvMF_2490 are separated by 200 nucleotidesDvMF_2490 and DvMF_2491 are separated by 130 nucleotidesDvMF_2491 and DvMF_2492 are separated by 95 nucleotides DvMF_2489: DvMF_2489 - diguanylate cyclase (RefSeq), at 3,141,523 to 3,144,033 _2489 DvMF_2490: DvMF_2490 - Polyprenyl synthetase (RefSeq), at 3,144,234 to 3,145,229 _2490 DvMF_2491: DvMF_2491 - purine or other phosphorylase family 1 (RefSeq), at 3,145,360 to 3,146,079 _2491 DvMF_2492: DvMF_2492 - hypothetical protein (RefSeq), at 3,146,175 to 3,146,324 _2492 Position (kb) 3144 3145 3146Strain fitness (log2 ratio) -1 0 1at 3143.798 kb on - strandat 3143.837 kb on - strandat 3144.039 kb on + strandat 3144.062 kb on + strandat 3144.239 kb on - strandat 3145.261 kb on + strandat 3145.293 kb on - strandat 3145.305 kb on + strandat 3145.384 kb on - strandat 3146.172 kb on - strandat 3146.223 kb on + strand, within DvMF_2492

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Per-strain Table

Position Strand Gene LocusTag Fraction rich MoYLS4
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3,143,798 - -0.6
3,143,837 - -0.1
3,144,039 + -0.3
3,144,062 + -0.2
3,144,239 - -0.1
3,145,261 + -0.1
3,145,293 - -0.6
3,145,305 + -0.1
3,145,384 - -1.0
3,146,172 - -0.2
3,146,223 + DvMF_2492 0.32 -0.2

Or see this region's nucleotide sequence