Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2115 and DvMF_2116 are separated by 108 nucleotides DvMF_2116 and DvMF_2117 are separated by 259 nucleotides DvMF_2117 and DvMF_2118 overlap by 11 nucleotides DvMF_2118 and DvMF_2119 are separated by 2 nucleotides
DvMF_2115: DvMF_2115 - hypothetical protein (RefSeq), at 2,635,097 to 2,635,339
_2115
DvMF_2116: DvMF_2116 - two-component system, regulatory protein (RefSeq), at 2,635,448 to 2,635,906
_2116
DvMF_2117: DvMF_2117 - Tetratricopeptide TPR_2 repeat protein (RefSeq), at 2,636,166 to 2,636,789
_2117
DvMF_2118: DvMF_2118 - hypothetical protein (RefSeq), at 2,636,779 to 2,637,171
_2118
DvMF_2119: DvMF_2119 - hypothetical protein (RefSeq), at 2,637,174 to 2,637,842
_2119
Position (kb) 2636
2637 Strain fitness (log2 ratio) -1
0
1 at 2635.205 kb on - strand, within DvMF_2115 at 2635.252 kb on + strand, within DvMF_2115 at 2635.300 kb on - strand, within DvMF_2115 at 2635.329 kb on + strand at 2635.446 kb on + strand at 2635.580 kb on - strand, within DvMF_2116 at 2635.875 kb on + strand at 2635.884 kb on - strand at 2636.134 kb on + strand at 2637.651 kb on - strand, within DvMF_2119
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 2,635,205 - DvMF_2115 0.44 -0.1 2,635,252 + DvMF_2115 0.64 -0.5 2,635,300 - DvMF_2115 0.84 -0.6 2,635,329 + -0.6 2,635,446 + -0.8 2,635,580 - DvMF_2116 0.29 -0.3 2,635,875 + -1.1 2,635,884 - -0.8 2,636,134 + -0.6 2,637,651 - DvMF_2119 0.71 -1.6
Or see this region's nucleotide sequence