Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1634 and DvMF_1635 overlap by 17 nucleotides DvMF_1635 and DvMF_1636 are separated by 51 nucleotides DvMF_1636 and DvMF_1637 are separated by 3 nucleotides DvMF_1637 and DvMF_1638 are separated by 2 nucleotides DvMF_1638 and DvMF_1639 overlap by 1 nucleotides
DvMF_1634: DvMF_1634 - phage protein (RefSeq), at 2,016,313 to 2,016,570
_1634
DvMF_1635: DvMF_1635 - transcriptional regulator, XRE family (RefSeq), at 2,016,554 to 2,016,892
_1635
DvMF_1636: DvMF_1636 - hypothetical protein (RefSeq), at 2,016,944 to 2,017,444
_1636
DvMF_1637: DvMF_1637 - hypothetical protein (RefSeq), at 2,017,448 to 2,017,771
_1637
DvMF_1638: DvMF_1638 - hypothetical protein (RefSeq), at 2,017,774 to 2,018,379
_1638
DvMF_1639: DvMF_1639 - Phage-related protein tail component-like protein (RefSeq), at 2,018,379 to 2,021,135
_1639
Position (kb)
2017
2018 Strain fitness (log2 ratio)
-1
0
1 at 2016.900 kb on - strand at 2017.129 kb on + strand, within DvMF_1636 at 2017.193 kb on - strand, within DvMF_1636 at 2017.358 kb on - strand, within DvMF_1636 at 2017.449 kb on - strand at 2017.471 kb on - strand at 2017.670 kb on - strand, within DvMF_1637 at 2017.732 kb on + strand, within DvMF_1637 at 2017.807 kb on - strand at 2017.818 kb on + strand at 2018.003 kb on - strand, within DvMF_1638 at 2018.053 kb on + strand, within DvMF_1638 at 2018.092 kb on - strand, within DvMF_1638 at 2018.422 kb on - strand at 2018.429 kb on - strand at 2018.435 kb on + strand at 2018.468 kb on + strand at 2018.562 kb on - strand at 2018.570 kb on - strand at 2018.675 kb on - strand, within DvMF_1639 at 2018.675 kb on - strand, within DvMF_1639 at 2018.686 kb on - strand, within DvMF_1639
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 2,016,900 - -0.1 2,017,129 + DvMF_1636 0.37 +0.0 2,017,193 - DvMF_1636 0.50 +0.1 2,017,358 - DvMF_1636 0.83 +0.1 2,017,449 - +0.6 2,017,471 - -0.1 2,017,670 - DvMF_1637 0.69 +0.1 2,017,732 + DvMF_1637 0.88 +0.4 2,017,807 - +0.4 2,017,818 + +0.5 2,018,003 - DvMF_1638 0.38 -0.1 2,018,053 + DvMF_1638 0.46 -0.2 2,018,092 - DvMF_1638 0.52 -0.3 2,018,422 - -0.1 2,018,429 - -0.7 2,018,435 + +0.0 2,018,468 + -0.4 2,018,562 - -0.3 2,018,570 - -0.0 2,018,675 - DvMF_1639 0.11 -0.1 2,018,675 - DvMF_1639 0.11 -0.1 2,018,686 - DvMF_1639 0.11 +0.1
Or see this region's nucleotide sequence