Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1360 and DvMF_1361 overlap by 1 nucleotides DvMF_1361 and DvMF_1362 are separated by 182 nucleotides DvMF_1362 and DvMF_1363 are separated by 59 nucleotides
DvMF_1360: DvMF_1360 - two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq), at 1,663,959 to 1,665,536
_1360
DvMF_1361: DvMF_1361 - integral membrane sensor signal transduction histidine kinase (RefSeq), at 1,665,536 to 1,668,274
_1361
DvMF_1362: DvMF_1362 - hypothetical protein (RefSeq), at 1,668,457 to 1,668,852
_1362
DvMF_1363: DvMF_1363 - hypothetical protein (RefSeq), at 1,668,912 to 1,670,654
_1363
Position (kb)
1665
1666
1667
1668
1669 Strain fitness (log2 ratio)
-1
0
1
2 at 1665.072 kb on - strand, within DvMF_1360 at 1665.176 kb on - strand, within DvMF_1360 at 1665.183 kb on - strand, within DvMF_1360 at 1665.183 kb on - strand, within DvMF_1360 at 1665.320 kb on + strand, within DvMF_1360 at 1665.328 kb on - strand, within DvMF_1360 at 1665.413 kb on - strand at 1665.413 kb on - strand at 1665.413 kb on - strand at 1665.524 kb on + strand at 1665.797 kb on + strand at 1666.164 kb on + strand, within DvMF_1361 at 1666.250 kb on + strand, within DvMF_1361 at 1666.292 kb on + strand, within DvMF_1361 at 1666.675 kb on + strand, within DvMF_1361 at 1666.956 kb on + strand, within DvMF_1361 at 1666.956 kb on + strand, within DvMF_1361 at 1666.962 kb on + strand, within DvMF_1361 at 1667.030 kb on + strand, within DvMF_1361 at 1667.347 kb on + strand, within DvMF_1361 at 1667.355 kb on - strand, within DvMF_1361 at 1667.846 kb on + strand, within DvMF_1361 at 1667.889 kb on + strand, within DvMF_1361 at 1667.993 kb on - strand, within DvMF_1361 at 1668.179 kb on - strand at 1668.182 kb on - strand at 1668.184 kb on - strand at 1668.378 kb on - strand at 1668.603 kb on + strand, within DvMF_1362 at 1668.671 kb on + strand, within DvMF_1362 at 1668.679 kb on - strand, within DvMF_1362 at 1668.698 kb on + strand, within DvMF_1362 at 1668.732 kb on - strand, within DvMF_1362 at 1668.974 kb on - strand at 1668.990 kb on + strand at 1669.150 kb on + strand, within DvMF_1363 at 1669.264 kb on + strand, within DvMF_1363
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 1,665,072 - DvMF_1360 0.71 -0.3 1,665,176 - DvMF_1360 0.77 -0.3 1,665,183 - DvMF_1360 0.78 -0.3 1,665,183 - DvMF_1360 0.78 +0.3 1,665,320 + DvMF_1360 0.86 -0.8 1,665,328 - DvMF_1360 0.87 -0.6 1,665,413 - -0.3 1,665,413 - -0.5 1,665,413 - -0.2 1,665,524 + -0.2 1,665,797 + -0.3 1,666,164 + DvMF_1361 0.23 -0.1 1,666,250 + DvMF_1361 0.26 -1.7 1,666,292 + DvMF_1361 0.28 -1.0 1,666,675 + DvMF_1361 0.42 +2.2 1,666,956 + DvMF_1361 0.52 -1.1 1,666,956 + DvMF_1361 0.52 -0.2 1,666,962 + DvMF_1361 0.52 -0.7 1,667,030 + DvMF_1361 0.55 -0.2 1,667,347 + DvMF_1361 0.66 -0.1 1,667,355 - DvMF_1361 0.66 -0.3 1,667,846 + DvMF_1361 0.84 -0.3 1,667,889 + DvMF_1361 0.86 -0.3 1,667,993 - DvMF_1361 0.90 -0.5 1,668,179 - -0.3 1,668,182 - -0.3 1,668,184 - +0.0 1,668,378 - -0.3 1,668,603 + DvMF_1362 0.37 -0.2 1,668,671 + DvMF_1362 0.54 +0.2 1,668,679 - DvMF_1362 0.56 -0.6 1,668,698 + DvMF_1362 0.61 -0.9 1,668,732 - DvMF_1362 0.69 +0.0 1,668,974 - -0.3 1,668,990 + -0.0 1,669,150 + DvMF_1363 0.14 -0.1 1,669,264 + DvMF_1363 0.20 -0.0
Or see this region's nucleotide sequence