Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1307 and DvMF_1308 overlap by 17 nucleotides DvMF_1308 and DvMF_1309 are separated by 77 nucleotides DvMF_1309 and DvMF_R0037 are separated by 269 nucleotides DvMF_R0037 and DvMF_1310 are separated by 618 nucleotides
DvMF_1307: DvMF_1307 - hypothetical protein (RefSeq), at 1,596,523 to 1,596,708
_1307
DvMF_1308: DvMF_1308 - DNA methylase N-4/N-6 domain protein (RefSeq), at 1,596,692 to 1,597,453
_1308
DvMF_1309: DvMF_1309 - hypothetical protein (RefSeq), at 1,597,531 to 1,598,331
_1309
DvMF_R0037: DvMF_R0037 - tRNA-Arg (RefSeq), at 1,598,601 to 1,598,677
_R0037
DvMF_1310: DvMF_1310 - FolC bifunctional protein (RefSeq), at 1,599,296 to 1,600,795
_1310
Position (kb)
1597
1598
1599 Strain fitness (log2 ratio)
-2
-1
0
1 at 1596.598 kb on - strand, within DvMF_1307 at 1596.755 kb on - strand at 1596.870 kb on - strand, within DvMF_1308 at 1596.945 kb on + strand, within DvMF_1308 at 1596.953 kb on - strand, within DvMF_1308 at 1597.088 kb on - strand, within DvMF_1308 at 1597.156 kb on - strand, within DvMF_1308 at 1597.251 kb on - strand, within DvMF_1308 at 1597.365 kb on + strand, within DvMF_1308 at 1597.772 kb on + strand, within DvMF_1309 at 1597.772 kb on + strand, within DvMF_1309 at 1597.814 kb on + strand, within DvMF_1309 at 1597.918 kb on + strand, within DvMF_1309 at 1597.982 kb on - strand, within DvMF_1309 at 1598.263 kb on - strand at 1598.263 kb on - strand at 1598.405 kb on - strand at 1598.407 kb on + strand at 1598.410 kb on - strand at 1598.456 kb on + strand at 1598.734 kb on + strand at 1598.762 kb on - strand at 1598.768 kb on - strand at 1598.907 kb on - strand at 1598.918 kb on + strand at 1598.918 kb on + strand at 1598.926 kb on - strand at 1598.940 kb on + strand at 1598.953 kb on - strand at 1599.162 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 1,596,598 - DvMF_1307 0.40 +0.3 1,596,755 - -0.0 1,596,870 - DvMF_1308 0.23 -0.1 1,596,945 + DvMF_1308 0.33 -0.2 1,596,953 - DvMF_1308 0.34 -0.5 1,597,088 - DvMF_1308 0.52 +0.3 1,597,156 - DvMF_1308 0.61 +0.4 1,597,251 - DvMF_1308 0.73 +0.4 1,597,365 + DvMF_1308 0.88 -0.2 1,597,772 + DvMF_1309 0.30 -0.0 1,597,772 + DvMF_1309 0.30 +0.1 1,597,814 + DvMF_1309 0.35 -0.3 1,597,918 + DvMF_1309 0.48 +0.6 1,597,982 - DvMF_1309 0.56 +0.1 1,598,263 - -0.3 1,598,263 - +0.5 1,598,405 - +0.4 1,598,407 + +0.2 1,598,410 - +0.3 1,598,456 + +0.2 1,598,734 + -0.6 1,598,762 - -0.5 1,598,768 - -0.5 1,598,907 - -0.8 1,598,918 + +0.1 1,598,918 + -0.4 1,598,926 - -0.7 1,598,940 + -0.8 1,598,953 - -2.3 1,599,162 - -0.3
Or see this region's nucleotide sequence