Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0788 and DvMF_0789 are separated by 278 nucleotides DvMF_0789 and DvMF_0790 are separated by 206 nucleotides DvMF_0790 and DvMF_0791 are separated by 181 nucleotides
DvMF_0788: DvMF_0788 - extracellular solute-binding protein family 5 (RefSeq), at 947,079 to 948,809
_0788
DvMF_0789: DvMF_0789 - Non-specific serine/threonine protein kinase (RefSeq), at 949,088 to 952,297
_0789
DvMF_0790: DvMF_0790 - hypothetical protein (RefSeq), at 952,504 to 952,866
_0790
DvMF_0791: DvMF_0791 - no description, at 953,048 to 954,794
_0791
Position (kb) 949
950
951
952
953 Strain fitness (log2 ratio) -1
0
1 at 948.111 kb on + strand, within DvMF_0788 at 948.234 kb on - strand, within DvMF_0788 at 948.250 kb on - strand, within DvMF_0788 at 948.311 kb on - strand, within DvMF_0788 at 948.334 kb on - strand, within DvMF_0788 at 948.409 kb on - strand, within DvMF_0788 at 948.463 kb on + strand, within DvMF_0788 at 948.465 kb on + strand, within DvMF_0788 at 948.767 kb on - strand at 948.767 kb on - strand at 948.829 kb on + strand at 951.652 kb on + strand, within DvMF_0789 at 952.294 kb on + strand at 952.364 kb on - strand at 952.479 kb on + strand at 952.638 kb on + strand, within DvMF_0790 at 952.639 kb on + strand, within DvMF_0790 at 953.045 kb on + strand at 953.091 kb on - strand at 953.144 kb on - strand at 953.160 kb on + strand at 953.160 kb on + strand at 953.160 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 948,111 + DvMF_0788 0.60 -0.4 948,234 - DvMF_0788 0.67 -0.4 948,250 - DvMF_0788 0.68 -0.1 948,311 - DvMF_0788 0.71 -0.4 948,334 - DvMF_0788 0.73 -0.4 948,409 - DvMF_0788 0.77 -0.2 948,463 + DvMF_0788 0.80 +0.3 948,465 + DvMF_0788 0.80 -0.1 948,767 - +0.1 948,767 - -0.2 948,829 + -0.7 951,652 + DvMF_0789 0.80 -0.2 952,294 + -0.4 952,364 - -0.2 952,479 + -0.4 952,638 + DvMF_0790 0.37 -0.3 952,639 + DvMF_0790 0.37 +0.8 953,045 + -0.2 953,091 - -0.4 953,144 - -0.3 953,160 + -0.1 953,160 + -0.1 953,160 + -0.7
Or see this region's nucleotide sequence