Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_0013

Experiment: rich MoYLS4

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDvMF_0012 and DvMF_0013 are separated by 21 nucleotidesDvMF_0013 and DvMF_0014 are separated by 654 nucleotides DvMF_0012: DvMF_0012 - glyceraldehyde-3-phosphate dehydrogenase, type I (RefSeq), at 16,161 to 17,159 _0012 DvMF_0013: DvMF_0013 - fructose-1,6-bisphosphate aldolase, class II (RefSeq), at 17,181 to 18,104 _0013 DvMF_0014: DvMF_0014 - hypothetical protein (RefSeq), at 18,759 to 21,203 _0014 Position (kb) 17 18 19Strain fitness (log2 ratio) -1 0 1at 18.305 kb on + strandat 18.576 kb on + strandat 18.707 kb on - strandat 18.715 kb on + strandat 18.810 kb on - strandat 18.817 kb on + strandat 19.087 kb on + strand, within DvMF_0014

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Per-strain Table

Position Strand Gene LocusTag Fraction rich MoYLS4
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18,305 + -0.1
18,576 + -0.4
18,707 - +0.2
18,715 + +0.3
18,810 - -0.2
18,817 + -0.2
19,087 + DvMF_0014 0.13 -0.2

Or see this region's nucleotide sequence