Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1096

Experiment: L-Lactate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Lactate (C)
1,186,614	+				+0.2
1,186,615	-				+0.2
1,186,645	+				-0.1
1,186,645	+				+1.3
1,186,645	+				+0.0
1,186,645	+				-0.7
1,186,645	+				-0.2
1,186,645	+				+0.2
1,186,645	+				+0.0
1,186,646	-				-0.5
1,186,646	-				-0.6
1,186,646	-				-0.4
1,186,646	-				+0.3
1,186,646	-				+0.5
1,186,647	+				-0.9
1,186,647	+				-0.3
1,186,683	+				-0.4
1,186,684	-				+0.1
1,186,687	+				+0.4
1,186,687	+				-0.9
1,186,687	+				-0.0
1,186,687	+				+0.4
1,186,687	+				+0.3
1,186,687	+				-0.5
1,186,687	+				+0.5
1,186,688	+				-0.1
1,186,688	-				-2.0
1,186,688	-				+0.0
1,186,688	-				-0.3
1,186,688	-				+0.0
1,186,688	-				-0.2
1,186,688	-				+0.5
1,186,688	-				-0.6
1,186,740	-		Psest_1095	0.13	-0.3
1,186,805	+		Psest_1095	0.20	-0.1
1,186,805	+		Psest_1095	0.20	-0.0
1,186,805	+		Psest_1095	0.20	+0.2
1,186,805	+		Psest_1095	0.20	-0.2
1,186,805	+		Psest_1095	0.20	-0.1
1,186,805	+		Psest_1095	0.20	+0.1
1,186,806	-		Psest_1095	0.20	+0.6
1,186,806	-		Psest_1095	0.20	-0.4
1,186,806	-		Psest_1095	0.20	+0.0
1,186,806	-		Psest_1095	0.20	-0.3
1,186,806	-		Psest_1095	0.20	+0.6
1,186,806	-		Psest_1095	0.20	+0.0
1,186,806	-		Psest_1095	0.20	+0.6
1,186,806	-		Psest_1095	0.20	+0.0
1,186,946	-		Psest_1095	0.37	-0.3
1,186,946	-		Psest_1095	0.37	+1.2
1,187,012	+		Psest_1095	0.44	-1.0
1,187,012	+		Psest_1095	0.44	-1.4
1,187,030	+		Psest_1095	0.46	-0.7
1,187,083	+		Psest_1095	0.52	+0.6
1,187,083	+		Psest_1095	0.52	+0.2
1,187,083	+		Psest_1095	0.52	-0.4
1,187,181	-		Psest_1095	0.64	+0.2
1,187,181	-		Psest_1095	0.64	-0.5
1,187,239	+		Psest_1095	0.70	-0.8
1,187,239	+		Psest_1095	0.70	-1.8
1,187,239	+		Psest_1095	0.70	-2.5
1,187,239	+		Psest_1095	0.70	-0.5
1,187,239	+		Psest_1095	0.70	-0.6
1,187,240	-		Psest_1095	0.71	+0.1
1,187,240	-		Psest_1095	0.71	-0.4
1,187,240	-		Psest_1095	0.71	+0.3
1,187,240	-		Psest_1095	0.71	-0.7
1,187,240	-		Psest_1095	0.71	+0.1
1,187,240	-		Psest_1095	0.71	-0.0
1,187,240	-		Psest_1095	0.71	+0.2
1,187,240	-		Psest_1095	0.71	+0.5
1,187,260	+		Psest_1095	0.73	+0.2
1,187,260	+		Psest_1095	0.73	-1.9
1,187,260	+		Psest_1095	0.73	-0.6
1,187,260	+				-0.5
1,187,260	+		Psest_1095	0.73	-0.1
1,187,260	+		Psest_1095	0.73	-0.4
1,187,260	+		Psest_1095	0.73	-0.7
1,187,261	-		Psest_1095	0.73	+0.1
1,187,261	-		Psest_1095	0.73	-0.1
1,187,261	-		Psest_1095	0.73	+0.2
1,187,296	-		Psest_1095	0.77	+0.0
1,187,296	-		Psest_1095	0.77	-0.1
1,187,296	-		Psest_1095	0.77	-0.2
1,187,296	-		Psest_1095	0.77	-0.1
1,187,317	+		Psest_1095	0.80	-0.0
1,187,480	-				-0.4
1,187,480	-				-0.3
1,187,480	-				-0.7
1,187,694	-		Psest_1096	0.13	-4.5
1,187,745	+		Psest_1096	0.18	-1.6
1,187,763	+		Psest_1096	0.20	-0.4
1,187,763	+		Psest_1096	0.20	+0.1
1,187,816	+		Psest_1096	0.25	-1.0
1,187,816	+		Psest_1096	0.25	+0.1
1,187,816	+		Psest_1096	0.25	-1.1
1,187,817	-		Psest_1096	0.25	-0.5
1,187,817	-		Psest_1096	0.25	-0.9
1,187,824	+		Psest_1096	0.26	-1.5
1,187,873	+		Psest_1096	0.30	-0.9
1,187,873	+		Psest_1096	0.30	-0.3
1,187,874	-		Psest_1096	0.30	-0.4
1,187,874	-		Psest_1096	0.30	-0.9
1,187,901	+		Psest_1096	0.33	-0.3
1,187,902	-		Psest_1096	0.33	-0.6
1,187,955	+		Psest_1096	0.38	-1.1
1,187,979	+		Psest_1096	0.40	-1.8
1,187,979	+		Psest_1096	0.40	-0.5
1,187,980	-		Psest_1096	0.40	-0.0
1,187,980	-		Psest_1096	0.40	-0.4
1,187,980	-		Psest_1096	0.40	-0.2
1,188,043	-		Psest_1096	0.46	-0.4
1,188,060	+		Psest_1096	0.47	-1.0
1,188,060	+		Psest_1096	0.47	-0.3
1,188,060	+		Psest_1096	0.47	-0.4
1,188,061	-		Psest_1096	0.48	-0.9
1,188,069	+		Psest_1096	0.48	-0.2
1,188,070	-		Psest_1096	0.48	-0.5
1,188,091	-		Psest_1096	0.50	+0.1
1,188,091	-		Psest_1096	0.50	-0.1
1,188,139	+		Psest_1096	0.55	-1.3
1,188,140	-		Psest_1096	0.55	-0.6
1,188,225	+		Psest_1096	0.63	-0.8
1,188,225	+		Psest_1096	0.63	-0.2
1,188,408	+		Psest_1096	0.80	-0.5
1,188,409	-		Psest_1096	0.80	-0.1
1,188,506	+		Psest_1096	0.89	-0.7
1,188,606	+				-0.1
1,188,606	+				-2.3
1,188,606	+				+0.2
1,188,606	+				+0.7
1,188,607	-				-0.4
1,188,607	-				-0.3
1,188,607	-				-0.8
1,188,607	-				-1.2
1,188,607	-				-0.9
1,188,607	-				-0.9
1,188,607	-				-0.0
1,188,607	-				-0.4
1,188,607	-				-0.5
1,188,607	-				-1.3
1,188,612	+				-0.8
1,188,613	-				-1.0
1,188,632	+				+0.1
1,188,632	+				-1.1
1,188,633	-				-0.3
1,188,633	-				-0.5
1,188,694	+				+0.1
1,188,869	+		Psest_1097	0.13	-0.2
1,188,869	+		Psest_1097	0.13	-0.1
1,188,869	+		Psest_1097	0.13	-0.6
1,188,870	-		Psest_1097	0.13	-1.6
1,189,030	-		Psest_1097	0.22	-0.5
1,189,117	+		Psest_1097	0.27	-0.7
1,189,117	+		Psest_1097	0.27	-1.6
1,189,117	+		Psest_1097	0.27	-0.5
1,189,117	+		Psest_1097	0.27	-2.3
1,189,118	-		Psest_1097	0.27	-0.6
1,189,183	+		Psest_1097	0.30	+0.5
1,189,183	+		Psest_1097	0.30	-0.5
1,189,183	+		Psest_1097	0.30	-0.5
1,189,184	-		Psest_1097	0.30	-0.9
1,189,221	+		Psest_1097	0.32	+0.3
1,189,221	+		Psest_1097	0.32	+0.3
1,189,265	+		Psest_1097	0.35	+0.2
1,189,265	+		Psest_1097	0.35	-0.1
1,189,265	+		Psest_1097	0.35	+0.2
1,189,265	+		Psest_1097	0.35	-0.1
1,189,266	-		Psest_1097	0.35	-0.8
1,189,266	-		Psest_1097	0.35	-0.7
1,189,266	-		Psest_1097	0.35	+1.3
1,189,316	+		Psest_1097	0.37	-1.3
1,189,316	+		Psest_1097	0.37	-1.3
1,189,316	+		Psest_1097	0.37	-0.8
1,189,316	+		Psest_1097	0.37	-0.9
1,189,316	+		Psest_1097	0.37	-0.1
1,189,317	-		Psest_1097	0.37	-0.2
1,189,317	-		Psest_1097	0.37	-1.0
1,189,460	+		Psest_1097	0.45	-0.6
1,189,530	+		Psest_1097	0.49	+0.7
1,189,586	+		Psest_1097	0.52	-0.2
1,189,587	-		Psest_1097	0.52	+0.5
1,189,599	+		Psest_1097	0.53	-1.9
1,189,599	+		Psest_1097	0.53	-0.6
1,189,599	+		Psest_1097	0.53	-0.1
1,189,600	-		Psest_1097	0.53	-1.0
1,189,600	-		Psest_1097	0.53	+0.2
1,189,605	+		Psest_1097	0.53	-0.2
1,189,605	+		Psest_1097	0.53	-0.5