Experiment: rich media
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3502 and Dsui_3503 are separated by 7 nucleotides Dsui_3503 and Dsui_3504 are separated by 12 nucleotides Dsui_3504 and Dsui_3505 overlap by 1 nucleotides
Dsui_3502: Dsui_3502 - iron-sulfur cluster binding protein, putative, at 3,768,100 to 3,769,218
_3502
Dsui_3503: Dsui_3503 - protein of unknown function (DUF1992), at 3,769,226 to 3,769,651
_3503
Dsui_3504: Dsui_3504 - rhodanese-related sulfurtransferase, at 3,769,664 to 3,770,512
_3504
Dsui_3505: Dsui_3505 - Protein of unknown function (DUF3478), at 3,770,512 to 3,770,868
_3505
Position (kb)
3769
3770 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3768.251 kb on - strand, within Dsui_3502 at 3768.425 kb on - strand, within Dsui_3502 at 3768.428 kb on + strand, within Dsui_3502 at 3768.458 kb on + strand at 3768.481 kb on - strand at 3768.563 kb on + strand, within Dsui_3502 at 3768.639 kb on - strand, within Dsui_3502 at 3768.642 kb on + strand, within Dsui_3502 at 3768.800 kb on + strand, within Dsui_3502 at 3768.902 kb on - strand, within Dsui_3502 at 3769.075 kb on + strand, within Dsui_3502 at 3769.159 kb on + strand at 3769.172 kb on - strand at 3769.213 kb on + strand at 3769.275 kb on - strand, within Dsui_3503 at 3769.275 kb on - strand, within Dsui_3503 at 3769.327 kb on + strand at 3769.429 kb on + strand at 3769.514 kb on + strand at 3769.563 kb on - strand, within Dsui_3503 at 3769.596 kb on + strand, within Dsui_3503 at 3769.614 kb on - strand at 3769.643 kb on + strand at 3769.643 kb on + strand at 3769.716 kb on + strand at 3769.804 kb on - strand, within Dsui_3504 at 3769.828 kb on + strand, within Dsui_3504 at 3769.831 kb on + strand at 3769.889 kb on - strand, within Dsui_3504 at 3770.225 kb on + strand, within Dsui_3504 at 3770.376 kb on + strand at 3770.411 kb on + strand, within Dsui_3504 at 3770.478 kb on - strand at 3770.616 kb on - strand, within Dsui_3505 at 3770.627 kb on - strand, within Dsui_3505
Per-strain Table
Position Strand Gene LocusTag Fraction rich media remove 3,768,251 - Dsui_3502 0.13 -1.0 3,768,425 - Dsui_3502 0.29 +1.0 3,768,428 + Dsui_3502 0.29 -0.5 3,768,458 + +1.7 3,768,481 - +0.7 3,768,563 + Dsui_3502 0.41 -0.1 3,768,639 - Dsui_3502 0.48 -0.2 3,768,642 + Dsui_3502 0.48 -0.4 3,768,800 + Dsui_3502 0.63 -1.4 3,768,902 - Dsui_3502 0.72 -0.8 3,769,075 + Dsui_3502 0.87 -0.4 3,769,159 + -0.7 3,769,172 - -0.0 3,769,213 + -2.1 3,769,275 - Dsui_3503 0.12 +0.1 3,769,275 - Dsui_3503 0.12 -0.3 3,769,327 + +1.7 3,769,429 + -0.0 3,769,514 + +2.3 3,769,563 - Dsui_3503 0.79 -0.8 3,769,596 + Dsui_3503 0.87 +0.9 3,769,614 - -0.5 3,769,643 + +0.3 3,769,643 + +0.3 3,769,716 + -0.0 3,769,804 - Dsui_3504 0.16 -0.6 3,769,828 + Dsui_3504 0.19 -0.3 3,769,831 + -0.5 3,769,889 - Dsui_3504 0.27 -1.0 3,770,225 + Dsui_3504 0.66 -0.5 3,770,376 + -0.5 3,770,411 + Dsui_3504 0.88 -1.2 3,770,478 - +0.5 3,770,616 - Dsui_3505 0.29 -0.1 3,770,627 - Dsui_3505 0.32 -1.8
Or see this region's nucleotide sequence