Strain Fitness in Dechlorosoma suillum PS around Dsui_3502

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_3500 and Dsui_3501 overlap by 52 nucleotidesDsui_3501 and Dsui_3502 are separated by 18 nucleotidesDsui_3502 and Dsui_3503 are separated by 7 nucleotidesDsui_3503 and Dsui_3504 are separated by 12 nucleotides Dsui_3500: Dsui_3500 - N-acetylmuramoyl-L-alanine amidase, at 3,766,238 to 3,767,605 _3500 Dsui_3501: Dsui_3501 - ATPase, YjeE family, at 3,767,554 to 3,768,081 _3501 Dsui_3502: Dsui_3502 - iron-sulfur cluster binding protein, putative, at 3,768,100 to 3,769,218 _3502 Dsui_3503: Dsui_3503 - protein of unknown function (DUF1992), at 3,769,226 to 3,769,651 _3503 Dsui_3504: Dsui_3504 - rhodanese-related sulfurtransferase, at 3,769,664 to 3,770,512 _3504 Position (kb) 3768 3769 3770Strain fitness (log2 ratio) -2 -1 0 1 2at 3768.172 kb on - strandat 3768.190 kb on + strandat 3768.251 kb on - strand, within Dsui_3502at 3768.425 kb on - strand, within Dsui_3502at 3768.428 kb on + strand, within Dsui_3502at 3768.458 kb on + strandat 3768.481 kb on - strandat 3768.563 kb on + strand, within Dsui_3502at 3768.639 kb on - strand, within Dsui_3502at 3768.642 kb on + strand, within Dsui_3502at 3768.800 kb on + strand, within Dsui_3502at 3768.902 kb on - strand, within Dsui_3502at 3769.075 kb on + strand, within Dsui_3502at 3769.159 kb on + strandat 3769.172 kb on - strandat 3769.213 kb on + strandat 3769.275 kb on - strand, within Dsui_3503at 3769.275 kb on - strand, within Dsui_3503at 3769.327 kb on + strandat 3769.429 kb on + strandat 3769.514 kb on + strandat 3769.563 kb on - strand, within Dsui_3503at 3769.596 kb on + strand, within Dsui_3503at 3769.614 kb on - strandat 3769.643 kb on + strandat 3769.643 kb on + strandat 3769.716 kb on + strandat 3769.804 kb on - strand, within Dsui_3504at 3769.828 kb on + strand, within Dsui_3504at 3769.831 kb on + strandat 3769.889 kb on - strand, within Dsui_3504

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Per-strain Table

Position Strand Gene LocusTag Fraction rich media
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3,768,172 - -0.2
3,768,190 + -0.9
3,768,251 - Dsui_3502 0.13 -1.0
3,768,425 - Dsui_3502 0.29 +1.0
3,768,428 + Dsui_3502 0.29 -0.5
3,768,458 + +1.7
3,768,481 - +0.7
3,768,563 + Dsui_3502 0.41 -0.1
3,768,639 - Dsui_3502 0.48 -0.2
3,768,642 + Dsui_3502 0.48 -0.4
3,768,800 + Dsui_3502 0.63 -1.4
3,768,902 - Dsui_3502 0.72 -0.8
3,769,075 + Dsui_3502 0.87 -0.4
3,769,159 + -0.7
3,769,172 - -0.0
3,769,213 + -2.1
3,769,275 - Dsui_3503 0.12 +0.1
3,769,275 - Dsui_3503 0.12 -0.3
3,769,327 + +1.7
3,769,429 + -0.0
3,769,514 + +2.3
3,769,563 - Dsui_3503 0.79 -0.8
3,769,596 + Dsui_3503 0.87 +0.9
3,769,614 - -0.5
3,769,643 + +0.3
3,769,643 + +0.3
3,769,716 + -0.0
3,769,804 - Dsui_3504 0.16 -0.6
3,769,828 + Dsui_3504 0.19 -0.3
3,769,831 + -0.5
3,769,889 - Dsui_3504 0.27 -1.0

Or see this region's nucleotide sequence