Experiment: rich media
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3441 and Dsui_3442 are separated by 26 nucleotides Dsui_3442 and Dsui_3443 are separated by 82 nucleotides
Dsui_3441: Dsui_3441 - cation/multidrug efflux pump, at 3,696,299 to 3,699,550
_3441
Dsui_3442: Dsui_3442 - NADH dehydrogenase, FAD-containing subunit, at 3,699,577 to 3,700,851
_3442
Dsui_3443: Dsui_3443 - RND family efflux transporter, MFP subunit, at 3,700,934 to 3,702,013
_3443
Position (kb)
3699
3700
3701 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3698.598 kb on - strand, within Dsui_3441 at 3698.720 kb on - strand, within Dsui_3441 at 3698.722 kb on + strand, within Dsui_3441 at 3698.730 kb on - strand, within Dsui_3441 at 3698.836 kb on + strand at 3698.880 kb on - strand, within Dsui_3441 at 3699.169 kb on + strand at 3699.315 kb on - strand at 3699.415 kb on - strand at 3699.555 kb on + strand at 3699.606 kb on + strand at 3699.686 kb on + strand at 3699.751 kb on - strand at 3699.833 kb on - strand, within Dsui_3442 at 3699.895 kb on + strand at 3700.034 kb on - strand at 3700.046 kb on - strand, within Dsui_3442 at 3700.169 kb on - strand, within Dsui_3442 at 3700.184 kb on - strand at 3700.227 kb on - strand, within Dsui_3442 at 3700.257 kb on + strand, within Dsui_3442 at 3700.265 kb on - strand, within Dsui_3442 at 3700.286 kb on - strand, within Dsui_3442 at 3700.302 kb on - strand, within Dsui_3442 at 3700.302 kb on - strand, within Dsui_3442 at 3700.404 kb on + strand, within Dsui_3442 at 3700.530 kb on - strand, within Dsui_3442 at 3700.635 kb on + strand at 3700.637 kb on - strand, within Dsui_3442 at 3700.694 kb on + strand at 3700.718 kb on - strand, within Dsui_3442 at 3700.909 kb on + strand at 3701.078 kb on + strand, within Dsui_3443 at 3701.086 kb on - strand, within Dsui_3443 at 3701.242 kb on - strand, within Dsui_3443 at 3701.373 kb on - strand at 3701.469 kb on - strand at 3701.524 kb on - strand, within Dsui_3443 at 3701.568 kb on + strand at 3701.574 kb on + strand, within Dsui_3443 at 3701.579 kb on + strand, within Dsui_3443 at 3701.587 kb on - strand at 3701.587 kb on - strand, within Dsui_3443 at 3701.625 kb on - strand, within Dsui_3443 at 3701.651 kb on + strand, within Dsui_3443
Per-strain Table
Position Strand Gene LocusTag Fraction rich media remove 3,698,598 - Dsui_3441 0.71 -0.0 3,698,720 - Dsui_3441 0.74 -0.4 3,698,722 + Dsui_3441 0.75 -0.4 3,698,730 - Dsui_3441 0.75 -1.0 3,698,836 + -0.7 3,698,880 - Dsui_3441 0.79 -2.2 3,699,169 + +1.3 3,699,315 - +1.4 3,699,415 - -0.7 3,699,555 + +0.7 3,699,606 + +1.3 3,699,686 + +0.7 3,699,751 - +1.3 3,699,833 - Dsui_3442 0.20 -0.5 3,699,895 + +0.7 3,700,034 - +1.3 3,700,046 - Dsui_3442 0.37 -0.8 3,700,169 - Dsui_3442 0.46 -0.4 3,700,184 - -0.0 3,700,227 - Dsui_3442 0.51 -1.0 3,700,257 + Dsui_3442 0.53 -0.5 3,700,265 - Dsui_3442 0.54 -0.4 3,700,286 - Dsui_3442 0.56 -0.3 3,700,302 - Dsui_3442 0.57 -1.0 3,700,302 - Dsui_3442 0.57 +0.7 3,700,404 + Dsui_3442 0.65 -1.0 3,700,530 - Dsui_3442 0.75 +0.5 3,700,635 + +1.3 3,700,637 - Dsui_3442 0.83 -0.7 3,700,694 + +0.3 3,700,718 - Dsui_3442 0.89 -0.3 3,700,909 + +2.3 3,701,078 + Dsui_3443 0.13 +0.5 3,701,086 - Dsui_3443 0.14 +1.3 3,701,242 - Dsui_3443 0.29 -0.1 3,701,373 - +1.0 3,701,469 - +0.5 3,701,524 - Dsui_3443 0.55 +0.7 3,701,568 + -0.7 3,701,574 + Dsui_3443 0.59 -1.0 3,701,579 + Dsui_3443 0.60 +0.7 3,701,587 - -0.3 3,701,587 - Dsui_3443 0.60 -0.4 3,701,625 - Dsui_3443 0.64 -0.0 3,701,651 + Dsui_3443 0.66 -0.4
Or see this region's nucleotide sequence