Experiment: rich media
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2463 and Dsui_2464 are separated by 158 nucleotides Dsui_2464 and Dsui_2465 overlap by 4 nucleotides Dsui_2465 and Dsui_2466 are separated by 29 nucleotides
Dsui_2463: Dsui_2463 - pyridoxine 5''-phosphate synthase, at 2,620,425 to 2,621,177
_2463
Dsui_2464: Dsui_2464 - holo-(acyl-carrier-protein) synthase, at 2,621,336 to 2,621,725
_2464
Dsui_2465: Dsui_2465 - beta-glucosidase-like glycosyl hydrolase, at 2,621,722 to 2,622,747
_2465
Dsui_2466: Dsui_2466 - ATP dependent DNA ligase-like protein, at 2,622,777 to 2,623,622
_2466
Position (kb)
2621
2622
2623 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2621.187 kb on - strand at 2621.188 kb on + strand at 2621.211 kb on + strand at 2621.211 kb on + strand at 2621.246 kb on + strand at 2621.258 kb on + strand at 2621.258 kb on + strand at 2621.258 kb on + strand at 2621.258 kb on + strand at 2621.258 kb on + strand at 2621.266 kb on - strand at 2621.266 kb on - strand at 2621.266 kb on - strand at 2621.267 kb on + strand at 2621.316 kb on - strand at 2621.778 kb on + strand at 2621.803 kb on + strand at 2621.811 kb on - strand at 2621.828 kb on + strand, within Dsui_2465 at 2621.868 kb on + strand, within Dsui_2465 at 2621.897 kb on - strand, within Dsui_2465 at 2621.897 kb on - strand at 2621.897 kb on - strand, within Dsui_2465 at 2622.046 kb on + strand, within Dsui_2465 at 2622.053 kb on - strand at 2622.209 kb on + strand, within Dsui_2465 at 2622.209 kb on + strand at 2622.272 kb on - strand, within Dsui_2465 at 2622.273 kb on - strand, within Dsui_2465 at 2622.520 kb on - strand, within Dsui_2465 at 2622.536 kb on - strand, within Dsui_2465 at 2622.836 kb on + strand at 2622.836 kb on + strand at 2622.844 kb on - strand at 2622.931 kb on + strand at 2623.083 kb on + strand, within Dsui_2466 at 2623.126 kb on + strand, within Dsui_2466 at 2623.236 kb on - strand at 2623.282 kb on - strand at 2623.485 kb on - strand at 2623.570 kb on + strand at 2623.577 kb on - strand at 2623.605 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction rich media remove 2,621,187 - +2.4 2,621,188 + +0.5 2,621,211 + +0.9 2,621,211 + +0.3 2,621,246 + -0.4 2,621,258 + -0.1 2,621,258 + -0.3 2,621,258 + -0.2 2,621,258 + -0.8 2,621,258 + -0.2 2,621,266 - +0.6 2,621,266 - -0.2 2,621,266 - +0.1 2,621,267 + -0.3 2,621,316 - +0.4 2,621,778 + +0.1 2,621,803 + +0.6 2,621,811 - -0.4 2,621,828 + Dsui_2465 0.10 +0.1 2,621,868 + Dsui_2465 0.14 +0.3 2,621,897 - Dsui_2465 0.17 -1.3 2,621,897 - +0.9 2,621,897 - Dsui_2465 0.17 -0.3 2,622,046 + Dsui_2465 0.32 -1.6 2,622,053 - +0.6 2,622,209 + Dsui_2465 0.47 +1.3 2,622,209 + +0.1 2,622,272 - Dsui_2465 0.54 -0.7 2,622,273 - Dsui_2465 0.54 +0.7 2,622,520 - Dsui_2465 0.78 +2.4 2,622,536 - Dsui_2465 0.79 +1.2 2,622,836 + -0.1 2,622,836 + +0.3 2,622,844 - -2.1 2,622,931 + +0.6 2,623,083 + Dsui_2466 0.36 -1.1 2,623,126 + Dsui_2466 0.41 -2.2 2,623,236 - +0.1 2,623,282 - +1.5 2,623,485 - +2.5 2,623,570 + -0.5 2,623,577 - +1.1 2,623,605 - +0.3
Or see this region's nucleotide sequence