Strain Fitness in Dechlorosoma suillum PS around Dsui_2206

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_2205 and Dsui_2206 are separated by 177 nucleotidesDsui_2206 and Dsui_2207 are separated by 37 nucleotides Dsui_2205: Dsui_2205 - aconitate hydratase 2, at 2,342,477 to 2,345,074 _2205 Dsui_2206: Dsui_2206 - putative rRNA methylase SpoU family, at 2,345,252 to 2,345,800 _2206 Dsui_2207: Dsui_2207 - uncharacterized protein involved in response to NO, at 2,345,838 to 2,346,998 _2207 Position (kb) 2345 2346Strain fitness (log2 ratio) -1 0 1 2 3at 2345.091 kb on - strandat 2345.218 kb on + strandat 2345.218 kb on + strandat 2345.257 kb on - strandat 2345.292 kb on + strandat 2345.300 kb on - strandat 2345.300 kb on - strandat 2345.372 kb on + strand, within Dsui_2206at 2345.380 kb on - strand, within Dsui_2206at 2345.449 kb on + strand, within Dsui_2206at 2345.465 kb on - strand, within Dsui_2206at 2345.467 kb on - strand, within Dsui_2206at 2345.499 kb on + strand, within Dsui_2206at 2345.521 kb on + strand, within Dsui_2206at 2345.558 kb on + strand, within Dsui_2206at 2345.558 kb on + strand, within Dsui_2206at 2345.558 kb on + strand, within Dsui_2206at 2345.558 kb on + strand, within Dsui_2206at 2345.565 kb on + strand, within Dsui_2206at 2345.692 kb on - strand, within Dsui_2206at 2345.702 kb on + strand, within Dsui_2206at 2345.734 kb on - strand, within Dsui_2206at 2345.759 kb on - strandat 2345.838 kb on - strandat 2345.908 kb on - strandat 2345.908 kb on - strandat 2345.953 kb on - strandat 2346.024 kb on + strand, within Dsui_2207at 2346.031 kb on - strand, within Dsui_2207at 2346.131 kb on + strand, within Dsui_2207at 2346.131 kb on + strand, within Dsui_2207at 2346.131 kb on + strand, within Dsui_2207at 2346.155 kb on + strandat 2346.155 kb on + strand, within Dsui_2207at 2346.193 kb on + strandat 2346.193 kb on - strand, within Dsui_2207at 2346.237 kb on + strand, within Dsui_2207at 2346.238 kb on - strand, within Dsui_2207at 2346.254 kb on - strand, within Dsui_2207at 2346.254 kb on - strand, within Dsui_2207at 2346.299 kb on + strand, within Dsui_2207at 2346.300 kb on + strand, within Dsui_2207at 2346.308 kb on - strand, within Dsui_2207at 2346.473 kb on + strand, within Dsui_2207at 2346.473 kb on + strand, within Dsui_2207at 2346.481 kb on - strandat 2346.481 kb on - strand, within Dsui_2207at 2346.481 kb on - strand, within Dsui_2207at 2346.481 kb on - strand, within Dsui_2207at 2346.481 kb on - strand, within Dsui_2207at 2346.481 kb on - strand, within Dsui_2207at 2346.482 kb on - strand, within Dsui_2207at 2346.592 kb on + strand, within Dsui_2207at 2346.623 kb on - strand, within Dsui_2207at 2346.735 kb on + strand, within Dsui_2207at 2346.735 kb on + strand, within Dsui_2207at 2346.738 kb on - strand, within Dsui_2207at 2346.784 kb on + strand, within Dsui_2207

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Per-strain Table

Position Strand Gene LocusTag Fraction rich media
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2,345,091 - -1.1
2,345,218 + -1.0
2,345,218 + +1.3
2,345,257 - +0.4
2,345,292 + +0.2
2,345,300 - -0.6
2,345,300 - -0.0
2,345,372 + Dsui_2206 0.22 +0.7
2,345,380 - Dsui_2206 0.23 +0.2
2,345,449 + Dsui_2206 0.36 +0.3
2,345,465 - Dsui_2206 0.39 +0.4
2,345,467 - Dsui_2206 0.39 +0.1
2,345,499 + Dsui_2206 0.45 -0.1
2,345,521 + Dsui_2206 0.49 +0.7
2,345,558 + Dsui_2206 0.56 -0.5
2,345,558 + Dsui_2206 0.56 +0.2
2,345,558 + Dsui_2206 0.56 +0.0
2,345,558 + Dsui_2206 0.56 +0.1
2,345,565 + Dsui_2206 0.57 -0.3
2,345,692 - Dsui_2206 0.80 +0.0
2,345,702 + Dsui_2206 0.82 -0.5
2,345,734 - Dsui_2206 0.88 +0.5
2,345,759 - +0.1
2,345,838 - -0.3
2,345,908 - +0.5
2,345,908 - -0.1
2,345,953 - -0.5
2,346,024 + Dsui_2207 0.16 +0.3
2,346,031 - Dsui_2207 0.17 +0.2
2,346,131 + Dsui_2207 0.25 -0.5
2,346,131 + Dsui_2207 0.25 +0.3
2,346,131 + Dsui_2207 0.25 -0.7
2,346,155 + -0.3
2,346,155 + Dsui_2207 0.27 -0.4
2,346,193 + +2.3
2,346,193 - Dsui_2207 0.31 +0.3
2,346,237 + Dsui_2207 0.34 +0.2
2,346,238 - Dsui_2207 0.34 -0.1
2,346,254 - Dsui_2207 0.36 +1.1
2,346,254 - Dsui_2207 0.36 +0.1
2,346,299 + Dsui_2207 0.40 -0.5
2,346,300 + Dsui_2207 0.40 +1.1
2,346,308 - Dsui_2207 0.40 -0.1
2,346,473 + Dsui_2207 0.55 +1.3
2,346,473 + Dsui_2207 0.55 -0.3
2,346,481 - +1.7
2,346,481 - Dsui_2207 0.55 +0.1
2,346,481 - Dsui_2207 0.55 +0.2
2,346,481 - Dsui_2207 0.55 +0.4
2,346,481 - Dsui_2207 0.55 +0.3
2,346,481 - Dsui_2207 0.55 +1.4
2,346,482 - Dsui_2207 0.55 +0.8
2,346,592 + Dsui_2207 0.65 -0.5
2,346,623 - Dsui_2207 0.68 -0.4
2,346,735 + Dsui_2207 0.77 +0.1
2,346,735 + Dsui_2207 0.77 +1.2
2,346,738 - Dsui_2207 0.78 +0.1
2,346,784 + Dsui_2207 0.81 +2.9

Or see this region's nucleotide sequence