Experiment: rich media
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1694 and Dsui_1695 are separated by 30 nucleotides Dsui_1695 and Dsui_1696 are separated by 36 nucleotides
Dsui_1694: Dsui_1694 - AAA ATPase, at 1,782,381 to 1,783,679
_1694
Dsui_1695: Dsui_1695 - hypothetical protein, at 1,783,710 to 1,784,069
_1695
Dsui_1696: Dsui_1696 - seryl-tRNA synthetase, at 1,784,106 to 1,785,389
_1696
Position (kb)
1782
1783
1784 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1781.447 kb on - strand at 1781.449 kb on + strand at 1781.449 kb on - strand at 1781.481 kb on + strand at 1781.487 kb on - strand at 1781.524 kb on + strand at 1781.533 kb on - strand at 1781.533 kb on - strand at 1781.535 kb on + strand at 1781.535 kb on + strand at 1781.543 kb on - strand at 1781.569 kb on + strand at 1781.594 kb on - strand at 1781.602 kb on - strand at 1781.670 kb on - strand at 1781.693 kb on + strand at 1781.693 kb on + strand at 1781.699 kb on + strand at 1781.701 kb on + strand at 1781.701 kb on + strand at 1781.701 kb on + strand at 1781.701 kb on + strand at 1781.701 kb on + strand at 1781.701 kb on - strand at 1781.709 kb on - strand at 1781.709 kb on - strand at 1781.739 kb on + strand at 1781.739 kb on + strand at 1781.749 kb on + strand at 1781.774 kb on + strand at 1781.774 kb on + strand at 1781.780 kb on + strand at 1781.788 kb on - strand at 1781.796 kb on - strand at 1781.796 kb on - strand at 1781.836 kb on + strand at 1781.836 kb on + strand at 1781.842 kb on + strand at 1781.844 kb on - strand at 1781.877 kb on + strand at 1781.885 kb on + strand at 1781.901 kb on + strand at 1781.901 kb on + strand at 1781.902 kb on - strand at 1781.909 kb on - strand at 1781.935 kb on + strand at 1781.985 kb on + strand at 1781.999 kb on + strand at 1782.007 kb on - strand at 1782.012 kb on - strand at 1782.012 kb on - strand at 1782.014 kb on + strand at 1782.014 kb on + strand at 1782.014 kb on + strand at 1782.022 kb on - strand at 1782.022 kb on - strand at 1782.022 kb on - strand at 1782.022 kb on - strand at 1782.029 kb on + strand at 1782.030 kb on + strand at 1782.031 kb on + strand at 1782.041 kb on + strand at 1782.053 kb on + strand at 1782.053 kb on + strand at 1782.061 kb on - strand at 1782.069 kb on - strand at 1782.089 kb on + strand at 1782.094 kb on - strand at 1782.117 kb on + strand at 1782.117 kb on + strand at 1782.133 kb on + strand at 1782.143 kb on + strand at 1782.143 kb on + strand at 1782.143 kb on + strand at 1782.151 kb on - strand at 1782.276 kb on - strand at 1782.301 kb on - strand at 1782.331 kb on + strand at 1782.565 kb on - strand, within Dsui_1694 at 1782.638 kb on + strand, within Dsui_1694 at 1782.680 kb on + strand, within Dsui_1694 at 1782.707 kb on + strand, within Dsui_1694 at 1782.727 kb on + strand, within Dsui_1694 at 1782.728 kb on - strand, within Dsui_1694 at 1782.852 kb on - strand, within Dsui_1694 at 1782.941 kb on - strand, within Dsui_1694 at 1783.009 kb on + strand, within Dsui_1694 at 1783.062 kb on + strand, within Dsui_1694 at 1783.114 kb on - strand, within Dsui_1694 at 1783.284 kb on + strand, within Dsui_1694 at 1783.334 kb on - strand, within Dsui_1694 at 1783.343 kb on + strand, within Dsui_1694 at 1783.423 kb on + strand, within Dsui_1694 at 1783.489 kb on - strand at 1783.501 kb on - strand, within Dsui_1694 at 1783.526 kb on - strand, within Dsui_1694 at 1783.526 kb on - strand, within Dsui_1694 at 1783.697 kb on - strand at 1783.757 kb on - strand at 1783.779 kb on - strand, within Dsui_1695 at 1783.789 kb on - strand, within Dsui_1695 at 1783.789 kb on - strand, within Dsui_1695 at 1783.803 kb on + strand, within Dsui_1695 at 1783.828 kb on + strand, within Dsui_1695 at 1783.857 kb on + strand, within Dsui_1695 at 1783.858 kb on - strand, within Dsui_1695 at 1783.858 kb on - strand, within Dsui_1695 at 1783.858 kb on - strand, within Dsui_1695 at 1783.860 kb on + strand, within Dsui_1695 at 1783.870 kb on - strand at 1783.904 kb on - strand, within Dsui_1695 at 1783.970 kb on + strand, within Dsui_1695 at 1783.984 kb on - strand, within Dsui_1695 at 1783.989 kb on - strand, within Dsui_1695
Per-strain Table
Position Strand Gene LocusTag Fraction rich media remove 1,781,447 - +0.6 1,781,449 + +0.4 1,781,449 - -0.3 1,781,481 + -0.4 1,781,487 - -0.5 1,781,524 + -0.2 1,781,533 - -0.4 1,781,533 - -0.4 1,781,535 + +0.2 1,781,535 + +0.5 1,781,543 - -1.5 1,781,569 + -0.5 1,781,594 - -0.5 1,781,602 - +1.4 1,781,670 - -0.6 1,781,693 + +0.2 1,781,693 + +0.0 1,781,699 + +0.3 1,781,701 + +0.8 1,781,701 + -0.2 1,781,701 + +0.1 1,781,701 + -0.4 1,781,701 + +0.3 1,781,701 - +0.4 1,781,709 - -1.6 1,781,709 - +0.1 1,781,739 + -0.2 1,781,739 + +0.3 1,781,749 + +0.2 1,781,774 + -1.3 1,781,774 + +0.2 1,781,780 + +0.5 1,781,788 - -0.3 1,781,796 - +0.1 1,781,796 - -0.4 1,781,836 + +0.5 1,781,836 + +0.5 1,781,842 + -0.2 1,781,844 - -0.1 1,781,877 + +0.2 1,781,885 + -0.1 1,781,901 + +0.4 1,781,901 + +0.8 1,781,902 - +0.1 1,781,909 - -0.1 1,781,935 + +0.3 1,781,985 + +1.1 1,781,999 + +0.1 1,782,007 - +0.0 1,782,012 - +0.1 1,782,012 - +0.4 1,782,014 + -0.6 1,782,014 + +0.5 1,782,014 + -0.5 1,782,022 - +0.1 1,782,022 - +0.8 1,782,022 - -1.8 1,782,022 - +0.2 1,782,029 + -0.9 1,782,030 + -0.3 1,782,031 + -0.0 1,782,041 + -0.1 1,782,053 + -0.3 1,782,053 + -0.2 1,782,061 - -1.0 1,782,069 - +1.1 1,782,089 + -0.3 1,782,094 - +0.1 1,782,117 + +0.4 1,782,117 + +0.4 1,782,133 + +0.4 1,782,143 + +0.9 1,782,143 + +0.8 1,782,143 + -0.0 1,782,151 - -0.1 1,782,276 - +0.5 1,782,301 - +0.2 1,782,331 + +0.3 1,782,565 - Dsui_1694 0.14 +0.5 1,782,638 + Dsui_1694 0.20 +0.2 1,782,680 + Dsui_1694 0.23 +0.1 1,782,707 + Dsui_1694 0.25 -0.1 1,782,727 + Dsui_1694 0.27 -0.2 1,782,728 - Dsui_1694 0.27 -0.1 1,782,852 - Dsui_1694 0.36 +0.3 1,782,941 - Dsui_1694 0.43 -0.2 1,783,009 + Dsui_1694 0.48 +0.1 1,783,062 + Dsui_1694 0.52 +0.2 1,783,114 - Dsui_1694 0.56 +0.5 1,783,284 + Dsui_1694 0.70 +0.0 1,783,334 - Dsui_1694 0.73 +0.1 1,783,343 + Dsui_1694 0.74 +0.6 1,783,423 + Dsui_1694 0.80 -0.0 1,783,489 - +1.3 1,783,501 - Dsui_1694 0.86 -0.8 1,783,526 - Dsui_1694 0.88 +1.0 1,783,526 - Dsui_1694 0.88 +0.3 1,783,697 - +1.9 1,783,757 - -0.1 1,783,779 - Dsui_1695 0.19 +0.2 1,783,789 - Dsui_1695 0.22 +0.5 1,783,789 - Dsui_1695 0.22 -0.4 1,783,803 + Dsui_1695 0.26 -0.1 1,783,828 + Dsui_1695 0.33 -0.5 1,783,857 + Dsui_1695 0.41 -0.2 1,783,858 - Dsui_1695 0.41 +0.0 1,783,858 - Dsui_1695 0.41 +0.5 1,783,858 - Dsui_1695 0.41 -0.6 1,783,860 + Dsui_1695 0.42 +0.7 1,783,870 - -0.1 1,783,904 - Dsui_1695 0.54 -0.3 1,783,970 + Dsui_1695 0.72 +0.4 1,783,984 - Dsui_1695 0.76 -0.2 1,783,989 - Dsui_1695 0.78 +0.5
Or see this region's nucleotide sequence