Experiment: rich media
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1689 and Dsui_1690 are separated by 155 nucleotides Dsui_1690 and Dsui_1691 are separated by 49 nucleotides Dsui_1691 and Dsui_1692 overlap by 1 nucleotides
Dsui_1689: Dsui_1689 - thioredoxin-disulfide reductase, at 1,776,432 to 1,777,391
_1689
Dsui_1690: Dsui_1690 - cAMP-binding protein, at 1,777,547 to 1,778,206
_1690
Dsui_1691: Dsui_1691 - DNA segregation ATPase, FtsK/SpoIIIE family, at 1,778,256 to 1,780,571
_1691
Dsui_1692: Dsui_1692 - periplasmic chaperone LolA, at 1,780,571 to 1,781,203
_1692
Position (kb)
1778
1779
1780
1781 Strain fitness (log2 ratio)
-1
0
1 at 1777.401 kb on - strand at 1777.511 kb on + strand at 1777.519 kb on - strand at 1777.545 kb on + strand at 1777.560 kb on - strand at 1777.562 kb on + strand at 1777.565 kb on - strand at 1777.570 kb on - strand at 1777.628 kb on + strand, within Dsui_1690 at 1777.633 kb on + strand, within Dsui_1690 at 1777.722 kb on - strand, within Dsui_1690 at 1777.724 kb on + strand, within Dsui_1690 at 1777.736 kb on - strand, within Dsui_1690 at 1777.788 kb on - strand, within Dsui_1690 at 1777.798 kb on - strand, within Dsui_1690 at 1777.944 kb on + strand, within Dsui_1690 at 1778.070 kb on + strand, within Dsui_1690 at 1778.070 kb on + strand, within Dsui_1690 at 1778.092 kb on - strand, within Dsui_1690 at 1778.235 kb on + strand at 1778.235 kb on + strand at 1778.235 kb on + strand at 1778.235 kb on + strand at 1781.206 kb on + strand at 1781.256 kb on + strand at 1781.267 kb on + strand at 1781.335 kb on + strand at 1781.374 kb on + strand at 1781.447 kb on - strand at 1781.449 kb on + strand at 1781.449 kb on - strand at 1781.481 kb on + strand at 1781.487 kb on - strand at 1781.524 kb on + strand at 1781.533 kb on - strand at 1781.533 kb on - strand at 1781.535 kb on + strand at 1781.535 kb on + strand at 1781.543 kb on - strand at 1781.569 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction rich media remove 1,777,401 - -0.1 1,777,511 + +0.3 1,777,519 - -0.3 1,777,545 + +0.0 1,777,560 - +1.5 1,777,562 + +0.0 1,777,565 - -0.7 1,777,570 - -0.9 1,777,628 + Dsui_1690 0.12 +0.4 1,777,633 + Dsui_1690 0.13 -0.5 1,777,722 - Dsui_1690 0.27 +0.6 1,777,724 + Dsui_1690 0.27 +0.7 1,777,736 - Dsui_1690 0.29 +0.7 1,777,788 - Dsui_1690 0.37 -0.2 1,777,798 - Dsui_1690 0.38 +0.4 1,777,944 + Dsui_1690 0.60 -0.2 1,778,070 + Dsui_1690 0.79 -0.4 1,778,070 + Dsui_1690 0.79 +0.0 1,778,092 - Dsui_1690 0.83 +0.5 1,778,235 + -1.2 1,778,235 + -1.0 1,778,235 + -0.5 1,778,235 + -1.2 1,781,206 + +0.6 1,781,256 + +0.3 1,781,267 + +0.1 1,781,335 + +0.1 1,781,374 + -0.1 1,781,447 - +0.6 1,781,449 + +0.4 1,781,449 - -0.3 1,781,481 + -0.4 1,781,487 - -0.5 1,781,524 + -0.2 1,781,533 - -0.4 1,781,533 - -0.4 1,781,535 + +0.2 1,781,535 + +0.5 1,781,543 - -1.5 1,781,569 + -0.5
Or see this region's nucleotide sequence