Strain Fitness in Dechlorosoma suillum PS around Dsui_1123

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_1122 and Dsui_1123 are separated by 150 nucleotidesDsui_1123 and Dsui_1124 are separated by 49 nucleotidesDsui_1124 and Dsui_1125 are separated by 61 nucleotides Dsui_1122: Dsui_1122 - dihydroxy-acid dehydratase, at 1,169,218 to 1,171,077 _1122 Dsui_1123: Dsui_1123 - methyl-accepting chemotaxis protein, at 1,171,228 to 1,172,841 _1123 Dsui_1124: Dsui_1124 - prolipoprotein diacylglyceryl transferase, at 1,172,891 to 1,173,676 _1124 Dsui_1125: Dsui_1125 - Malonyl-CoA decarboxylase (MCD), at 1,173,738 to 1,175,066 _1125 Position (kb) 1171 1172 1173Strain fitness (log2 ratio) -2 -1 0 1at 1171.443 kb on - strandat 1171.458 kb on - strand, within Dsui_1123at 1171.502 kb on + strand, within Dsui_1123at 1171.573 kb on - strand, within Dsui_1123at 1171.575 kb on + strand, within Dsui_1123at 1171.575 kb on + strand, within Dsui_1123at 1171.705 kb on - strand, within Dsui_1123at 1171.897 kb on + strand, within Dsui_1123at 1171.900 kb on - strand, within Dsui_1123at 1172.097 kb on + strand, within Dsui_1123at 1172.112 kb on - strand, within Dsui_1123at 1172.198 kb on - strand, within Dsui_1123at 1172.213 kb on + strand, within Dsui_1123at 1172.242 kb on + strand, within Dsui_1123at 1172.273 kb on + strand, within Dsui_1123at 1172.490 kb on + strand, within Dsui_1123at 1172.493 kb on - strand, within Dsui_1123at 1172.515 kb on + strand, within Dsui_1123at 1172.525 kb on + strand, within Dsui_1123at 1172.532 kb on - strand, within Dsui_1123at 1172.799 kb on + strandat 1172.799 kb on + strandat 1172.807 kb on - strandat 1172.863 kb on + strandat 1173.702 kb on - strandat 1173.807 kb on + strandat 1173.820 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction rich media
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1,171,443 - +0.5
1,171,458 - Dsui_1123 0.14 -2.1
1,171,502 + Dsui_1123 0.17 -0.2
1,171,573 - Dsui_1123 0.21 -0.5
1,171,575 + Dsui_1123 0.21 -0.8
1,171,575 + Dsui_1123 0.21 -0.1
1,171,705 - Dsui_1123 0.30 -0.5
1,171,897 + Dsui_1123 0.41 -0.5
1,171,900 - Dsui_1123 0.42 -0.2
1,172,097 + Dsui_1123 0.54 +0.1
1,172,112 - Dsui_1123 0.55 -0.9
1,172,198 - Dsui_1123 0.60 -1.1
1,172,213 + Dsui_1123 0.61 -1.9
1,172,242 + Dsui_1123 0.63 +0.3
1,172,273 + Dsui_1123 0.65 -0.8
1,172,490 + Dsui_1123 0.78 -0.0
1,172,493 - Dsui_1123 0.78 -0.7
1,172,515 + Dsui_1123 0.80 +0.0
1,172,525 + Dsui_1123 0.80 +0.6
1,172,532 - Dsui_1123 0.81 -1.1
1,172,799 + -0.5
1,172,799 + -0.5
1,172,807 - -1.3
1,172,863 + -0.1
1,173,702 - +1.2
1,173,807 + -0.5
1,173,820 + -0.7

Or see this region's nucleotide sequence