Strain Fitness in Dechlorosoma suillum PS around Dsui_0656

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_0654 and Dsui_0655 are separated by 125 nucleotidesDsui_0655 and Dsui_0656 are separated by 57 nucleotidesDsui_0656 and Dsui_0657 are separated by 33 nucleotides Dsui_0654: Dsui_0654 - hypothetical protein, at 647,870 to 648,325 _0654 Dsui_0655: Dsui_0655 - putative membrane protein, at 648,451 to 649,077 _0655 Dsui_0656: Dsui_0656 - chemotaxis protein histidine kinase-like protein, at 649,135 to 655,254 _0656 Dsui_0657: Dsui_0657 - methyl-accepting chemotaxis protein, at 655,288 to 657,486 _0657 Position (kb) 649 650 651 652 653 654 655 656Strain fitness (log2 ratio) -2 -1 0 1 2at 648.138 kb on + strand, within Dsui_0654at 648.144 kb on - strandat 648.185 kb on + strand, within Dsui_0654at 648.190 kb on + strand, within Dsui_0654at 648.193 kb on - strand, within Dsui_0654at 648.211 kb on + strand, within Dsui_0654at 648.225 kb on + strandat 648.226 kb on - strand, within Dsui_0654at 648.274 kb on + strand, within Dsui_0654at 648.282 kb on - strandat 648.399 kb on + strandat 648.421 kb on - strandat 648.421 kb on - strandat 648.423 kb on + strandat 648.448 kb on + strandat 648.497 kb on + strandat 648.505 kb on - strandat 648.582 kb on + strand, within Dsui_0655at 648.592 kb on + strand, within Dsui_0655at 648.600 kb on - strand, within Dsui_0655at 648.622 kb on + strand, within Dsui_0655at 648.675 kb on + strand, within Dsui_0655at 648.712 kb on - strand, within Dsui_0655at 648.910 kb on + strand, within Dsui_0655at 649.004 kb on - strand, within Dsui_0655at 649.004 kb on - strand, within Dsui_0655at 649.006 kb on + strand, within Dsui_0655at 649.014 kb on - strand, within Dsui_0655at 649.072 kb on + strandat 649.073 kb on + strandat 649.080 kb on - strandat 649.157 kb on + strandat 649.157 kb on + strandat 649.157 kb on + strandat 649.211 kb on - strandat 649.215 kb on + strandat 649.216 kb on - strandat 649.243 kb on - strandat 649.334 kb on - strandat 649.395 kb on + strandat 649.403 kb on - strandat 649.478 kb on + strandat 649.486 kb on - strandat 649.529 kb on + strandat 649.546 kb on + strandat 649.610 kb on - strandat 649.783 kb on - strand, within Dsui_0656at 649.804 kb on + strand, within Dsui_0656at 649.852 kb on - strand, within Dsui_0656at 649.852 kb on - strand, within Dsui_0656at 649.853 kb on + strand, within Dsui_0656at 649.867 kb on + strand, within Dsui_0656at 649.885 kb on - strand, within Dsui_0656at 649.913 kb on + strand, within Dsui_0656at 649.973 kb on + strand, within Dsui_0656at 649.997 kb on - strand, within Dsui_0656at 650.332 kb on - strand, within Dsui_0656at 650.515 kb on - strand, within Dsui_0656at 650.589 kb on - strand, within Dsui_0656at 650.641 kb on + strandat 651.166 kb on + strandat 651.169 kb on - strand, within Dsui_0656at 651.436 kb on - strand, within Dsui_0656at 651.494 kb on + strand, within Dsui_0656at 651.502 kb on - strand, within Dsui_0656at 651.502 kb on - strand, within Dsui_0656at 651.502 kb on - strand, within Dsui_0656at 651.638 kb on - strand, within Dsui_0656at 651.730 kb on - strand, within Dsui_0656at 651.776 kb on - strand, within Dsui_0656at 651.839 kb on - strand, within Dsui_0656at 651.840 kb on - strand, within Dsui_0656at 651.889 kb on - strand, within Dsui_0656at 651.919 kb on - strand, within Dsui_0656at 651.923 kb on + strand, within Dsui_0656at 651.923 kb on + strand, within Dsui_0656at 651.959 kb on + strand, within Dsui_0656at 651.967 kb on + strand, within Dsui_0656at 652.080 kb on - strand, within Dsui_0656at 652.503 kb on - strand, within Dsui_0656at 652.790 kb on - strand, within Dsui_0656at 652.941 kb on + strandat 652.949 kb on - strand, within Dsui_0656at 652.949 kb on - strand, within Dsui_0656at 652.971 kb on + strandat 653.103 kb on - strand, within Dsui_0656at 653.130 kb on + strandat 653.143 kb on - strand, within Dsui_0656at 653.191 kb on - strand, within Dsui_0656at 653.246 kb on + strand, within Dsui_0656at 653.339 kb on + strandat 653.339 kb on + strandat 653.347 kb on - strand, within Dsui_0656at 653.468 kb on + strand, within Dsui_0656at 653.877 kb on + strandat 653.885 kb on - strand, within Dsui_0656at 653.900 kb on - strand, within Dsui_0656at 653.969 kb on + strandat 653.977 kb on - strand, within Dsui_0656at 654.125 kb on - strand, within Dsui_0656at 654.171 kb on + strandat 654.174 kb on - strand, within Dsui_0656at 654.287 kb on + strandat 654.356 kb on + strand, within Dsui_0656at 654.402 kb on + strandat 654.414 kb on + strandat 654.589 kb on - strand, within Dsui_0656at 654.758 kb on + strandat 654.791 kb on + strandat 654.824 kb on + strandat 654.882 kb on + strandat 655.011 kb on + strandat 655.022 kb on + strandat 655.051 kb on - strandat 655.070 kb on - strandat 655.213 kb on - strandat 655.224 kb on - strandat 655.252 kb on + strandat 655.304 kb on - strandat 655.304 kb on - strandat 655.384 kb on + strandat 655.491 kb on + strandat 655.749 kb on + strand, within Dsui_0657at 655.817 kb on - strand, within Dsui_0657at 655.817 kb on - strand, within Dsui_0657at 655.868 kb on - strand, within Dsui_0657at 655.901 kb on + strandat 655.920 kb on - strand, within Dsui_0657at 655.996 kb on + strand, within Dsui_0657at 656.035 kb on - strand, within Dsui_0657at 656.085 kb on - strand, within Dsui_0657at 656.089 kb on + strand, within Dsui_0657at 656.102 kb on - strand, within Dsui_0657at 656.131 kb on - strand, within Dsui_0657at 656.137 kb on - strand, within Dsui_0657at 656.220 kb on - strand, within Dsui_0657

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Per-strain Table

Position Strand Gene LocusTag Fraction rich media
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648,138 + Dsui_0654 0.59 -0.3
648,144 - +1.3
648,185 + Dsui_0654 0.69 +0.9
648,190 + Dsui_0654 0.70 +0.3
648,193 - Dsui_0654 0.71 +1.0
648,211 + Dsui_0654 0.75 -0.3
648,225 + +1.0
648,226 - Dsui_0654 0.78 +0.6
648,274 + Dsui_0654 0.89 -0.6
648,282 - +1.8
648,399 + +0.3
648,421 - -0.2
648,421 - +0.5
648,423 + -1.2
648,448 + -0.2
648,497 + -0.3
648,505 - -0.7
648,582 + Dsui_0655 0.21 -0.8
648,592 + Dsui_0655 0.22 -0.1
648,600 - Dsui_0655 0.24 -1.0
648,622 + Dsui_0655 0.27 -0.5
648,675 + Dsui_0655 0.36 +0.1
648,712 - Dsui_0655 0.42 -0.8
648,910 + Dsui_0655 0.73 -0.2
649,004 - Dsui_0655 0.88 -0.6
649,004 - Dsui_0655 0.88 -0.3
649,006 + Dsui_0655 0.89 +1.1
649,014 - Dsui_0655 0.90 +0.1
649,072 + +0.2
649,073 + -0.3
649,080 - +0.1
649,157 + -0.3
649,157 + +0.4
649,157 + +0.7
649,211 - +0.1
649,215 + -0.0
649,216 - +0.3
649,243 - +0.1
649,334 - +0.5
649,395 + -1.0
649,403 - +0.2
649,478 + -0.0
649,486 - +0.3
649,529 + -0.0
649,546 + +0.5
649,610 - -0.2
649,783 - Dsui_0656 0.11 -2.3
649,804 + Dsui_0656 0.11 -2.0
649,852 - Dsui_0656 0.12 -1.1
649,852 - Dsui_0656 0.12 -0.8
649,853 + Dsui_0656 0.12 +0.0
649,867 + Dsui_0656 0.12 -0.2
649,885 - Dsui_0656 0.12 -0.7
649,913 + Dsui_0656 0.13 -0.8
649,973 + Dsui_0656 0.14 -0.6
649,997 - Dsui_0656 0.14 -0.9
650,332 - Dsui_0656 0.20 -1.6
650,515 - Dsui_0656 0.23 -1.6
650,589 - Dsui_0656 0.24 -0.6
650,641 + -0.3
651,166 + +2.3
651,169 - Dsui_0656 0.33 -0.2
651,436 - Dsui_0656 0.38 +1.7
651,494 + Dsui_0656 0.39 -1.2
651,502 - Dsui_0656 0.39 -0.6
651,502 - Dsui_0656 0.39 -1.1
651,502 - Dsui_0656 0.39 +0.5
651,638 - Dsui_0656 0.41 -0.7
651,730 - Dsui_0656 0.42 +0.7
651,776 - Dsui_0656 0.43 -1.3
651,839 - Dsui_0656 0.44 +1.0
651,840 - Dsui_0656 0.44 -1.7
651,889 - Dsui_0656 0.45 +0.6
651,919 - Dsui_0656 0.45 +1.0
651,923 + Dsui_0656 0.46 +1.0
651,923 + Dsui_0656 0.46 -0.2
651,959 + Dsui_0656 0.46 -1.2
651,967 + Dsui_0656 0.46 -1.4
652,080 - Dsui_0656 0.48 -0.8
652,503 - Dsui_0656 0.55 -0.3
652,790 - Dsui_0656 0.60 -0.0
652,941 + +0.7
652,949 - Dsui_0656 0.62 -0.9
652,949 - Dsui_0656 0.62 -0.7
652,971 + +0.7
653,103 - Dsui_0656 0.65 -0.5
653,130 + +2.3
653,143 - Dsui_0656 0.65 -1.0
653,191 - Dsui_0656 0.66 -0.5
653,246 + Dsui_0656 0.67 -1.2
653,339 + +0.7
653,339 + +1.0
653,347 - Dsui_0656 0.69 -0.9
653,468 + Dsui_0656 0.71 -2.2
653,877 + +0.7
653,885 - Dsui_0656 0.78 -0.5
653,900 - Dsui_0656 0.78 +1.3
653,969 + +0.5
653,977 - Dsui_0656 0.79 -2.0
654,125 - Dsui_0656 0.82 -0.5
654,171 + -0.3
654,174 - Dsui_0656 0.82 -1.2
654,287 + +1.3
654,356 + Dsui_0656 0.85 -0.9
654,402 + +0.7
654,414 + +0.3
654,589 - Dsui_0656 0.89 -0.8
654,758 + -0.8
654,791 + +0.3
654,824 + +0.9
654,882 + -2.0
655,011 + -0.1
655,022 + -1.2
655,051 - -0.0
655,070 - -0.3
655,213 - +0.6
655,224 - -0.2
655,252 + +0.2
655,304 - +0.7
655,304 - +0.0
655,384 + -0.1
655,491 + +0.3
655,749 + Dsui_0657 0.21 -0.0
655,817 - Dsui_0657 0.24 -0.8
655,817 - Dsui_0657 0.24 -1.0
655,868 - Dsui_0657 0.26 -0.1
655,901 + -0.0
655,920 - Dsui_0657 0.29 +0.4
655,996 + Dsui_0657 0.32 +1.3
656,035 - Dsui_0657 0.34 +0.5
656,085 - Dsui_0657 0.36 -0.6
656,089 + Dsui_0657 0.36 -0.9
656,102 - Dsui_0657 0.37 -0.0
656,131 - Dsui_0657 0.38 +1.2
656,137 - Dsui_0657 0.39 +0.2
656,220 - Dsui_0657 0.42 -1.9

Or see this region's nucleotide sequence