Experiment: rich media
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0295 and Dsui_0296 overlap by 4 nucleotides Dsui_0296 and Dsui_0297 are separated by 250 nucleotides
Dsui_0295: Dsui_0295 - hypothetical protein, at 294,940 to 297,729
_0295
Dsui_0296: Dsui_0296 - hypothetical protein, at 297,726 to 298,508
_0296
Dsui_0297: Dsui_0297 - sugar fermentation stimulation protein, at 298,759 to 299,478
_0297
Position (kb) 297
298
299 Strain fitness (log2 ratio) -1
0
1
2
3 at 296.896 kb on + strand at 296.898 kb on - strand, within Dsui_0295 at 297.308 kb on + strand at 297.400 kb on - strand at 297.480 kb on + strand at 297.516 kb on + strand at 297.618 kb on - strand at 297.767 kb on + strand at 297.801 kb on + strand at 297.868 kb on - strand at 297.879 kb on + strand, within Dsui_0296 at 298.136 kb on - strand at 298.141 kb on - strand, within Dsui_0296 at 298.146 kb on - strand, within Dsui_0296 at 298.416 kb on - strand at 298.452 kb on + strand at 298.517 kb on + strand at 298.830 kb on - strand at 298.860 kb on + strand, within Dsui_0297 at 298.860 kb on + strand at 298.938 kb on - strand, within Dsui_0297 at 298.960 kb on - strand, within Dsui_0297 at 298.960 kb on - strand, within Dsui_0297 at 298.986 kb on + strand at 298.991 kb on - strand, within Dsui_0297 at 299.249 kb on + strand, within Dsui_0297 at 299.284 kb on + strand, within Dsui_0297 at 299.346 kb on - strand at 299.369 kb on + strand at 299.409 kb on + strand at 299.464 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction rich media remove 296,896 + +2.4 296,898 - Dsui_0295 0.70 +1.0 297,308 + +2.4 297,400 - +1.4 297,480 + +2.4 297,516 + +2.4 297,618 - +1.6 297,767 + -0.8 297,801 + +0.1 297,868 - +2.4 297,879 + Dsui_0296 0.20 +0.5 298,136 - +1.4 298,141 - Dsui_0296 0.53 +0.9 298,146 - Dsui_0296 0.54 +1.1 298,416 - +0.1 298,452 + -1.7 298,517 + +1.4 298,830 - +0.2 298,860 + Dsui_0297 0.14 -0.3 298,860 + +2.0 298,938 - Dsui_0297 0.25 +0.3 298,960 - Dsui_0297 0.28 +0.1 298,960 - Dsui_0297 0.28 -0.4 298,986 + +2.8 298,991 - Dsui_0297 0.32 +0.7 299,249 + Dsui_0297 0.68 +1.8 299,284 + Dsui_0297 0.73 +0.5 299,346 - +1.4 299,369 + +1.8 299,409 + +0.8 299,464 - +0.3
Or see this region's nucleotide sequence