Experiment: rich media
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0272 and Dsui_0273 are separated by 9 nucleotides Dsui_0273 and Dsui_0274 are separated by 10 nucleotides Dsui_0274 and Dsui_0275 are separated by 216 nucleotides Dsui_0275 and Dsui_0276 overlap by 4 nucleotides Dsui_0276 and Dsui_0277 are separated by 9 nucleotides Dsui_0277 and Dsui_0278 are separated by 10 nucleotides
Dsui_0272: Dsui_0272 - osmosensitive K+ channel histidine kinase, at 273,118 to 275,814
_0272
Dsui_0273: Dsui_0273 - hypothetical protein, at 275,824 to 276,000
_0273
Dsui_0274: Dsui_0274 - hypothetical protein, at 276,011 to 276,313
_0274
Dsui_0275: Dsui_0275 - conserved hypothetical protein, proteobacterial, at 276,530 to 277,366
_0275
Dsui_0276: Dsui_0276 - hypothetical protein, at 277,363 to 277,503
_0276
Dsui_0277: Dsui_0277 - K+-transporting ATPase, C subunit, at 277,513 to 278,088
_0277
Dsui_0278: Dsui_0278 - K+-transporting ATPase, B subunit, at 278,099 to 280,177
_0278
Position (kb) 276
277
278 Strain fitness (log2 ratio) -1
0
1
2 at 275.548 kb on + strand at 275.582 kb on + strand at 275.589 kb on - strand at 275.600 kb on - strand at 275.637 kb on - strand at 275.697 kb on - strand at 275.743 kb on + strand at 275.855 kb on - strand, within Dsui_0273 at 275.855 kb on - strand, within Dsui_0273 at 276.002 kb on + strand at 276.030 kb on - strand at 276.095 kb on - strand, within Dsui_0274 at 276.374 kb on + strand at 276.464 kb on + strand at 276.464 kb on + strand at 276.485 kb on + strand at 276.582 kb on - strand at 276.811 kb on + strand, within Dsui_0275 at 276.827 kb on + strand at 276.860 kb on - strand at 276.895 kb on + strand, within Dsui_0275 at 276.897 kb on - strand, within Dsui_0275 at 276.903 kb on - strand, within Dsui_0275 at 276.903 kb on - strand at 276.903 kb on - strand at 276.934 kb on + strand at 276.942 kb on - strand, within Dsui_0275 at 277.035 kb on - strand, within Dsui_0275 at 277.058 kb on - strand at 277.058 kb on - strand, within Dsui_0275 at 277.079 kb on + strand, within Dsui_0275 at 277.161 kb on - strand, within Dsui_0275 at 277.193 kb on + strand at 277.222 kb on + strand at 277.225 kb on - strand at 277.225 kb on - strand, within Dsui_0275 at 277.263 kb on - strand at 277.280 kb on + strand, within Dsui_0275 at 277.350 kb on - strand at 277.561 kb on - strand at 277.595 kb on + strand at 277.711 kb on + strand at 277.763 kb on + strand at 277.819 kb on - strand, within Dsui_0277 at 277.866 kb on - strand, within Dsui_0277 at 277.967 kb on + strand, within Dsui_0277 at 278.021 kb on - strand at 278.049 kb on + strand at 278.062 kb on - strand at 278.102 kb on + strand at 278.105 kb on - strand at 278.107 kb on + strand at 278.161 kb on - strand at 278.163 kb on + strand at 278.182 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction rich media remove 275,548 + +2.4 275,582 + +1.4 275,589 - +0.4 275,600 - -0.6 275,637 - -0.3 275,697 - -0.4 275,743 + -0.4 275,855 - Dsui_0273 0.18 +1.2 275,855 - Dsui_0273 0.18 +1.7 276,002 + +1.4 276,030 - +0.1 276,095 - Dsui_0274 0.28 +0.7 276,374 + +0.4 276,464 + -0.2 276,464 + -1.1 276,485 + -1.2 276,582 - -1.2 276,811 + Dsui_0275 0.34 -1.1 276,827 + +0.8 276,860 - +0.8 276,895 + Dsui_0275 0.44 +0.4 276,897 - Dsui_0275 0.44 +1.0 276,903 - Dsui_0275 0.45 -0.4 276,903 - -0.4 276,903 - +0.8 276,934 + +1.4 276,942 - Dsui_0275 0.49 +0.9 277,035 - Dsui_0275 0.60 -0.5 277,058 - -0.6 277,058 - Dsui_0275 0.63 +1.0 277,079 + Dsui_0275 0.66 +0.1 277,161 - Dsui_0275 0.75 -0.8 277,193 + +1.8 277,222 + +1.1 277,225 - +1.4 277,225 - Dsui_0275 0.83 +0.4 277,263 - +0.4 277,280 + Dsui_0275 0.90 -0.6 277,350 - -0.9 277,561 - +0.1 277,595 + +0.4 277,711 + +1.4 277,763 + +0.1 277,819 - Dsui_0277 0.53 -0.4 277,866 - Dsui_0277 0.61 +1.1 277,967 + Dsui_0277 0.79 +1.6 278,021 - +0.8 278,049 + -0.2 278,062 - -0.2 278,102 + +1.4 278,105 - -0.4 278,107 + -0.9 278,161 - +0.1 278,163 + +0.8 278,182 - +1.4
Or see this region's nucleotide sequence