Experiment: rich media with sodium chlorite 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1637 and Dsui_1638 overlap by 4 nucleotides Dsui_1638 and Dsui_1639 overlap by 1 nucleotides Dsui_1639 and Dsui_1640 are separated by 124 nucleotides Dsui_1640 and Dsui_1641 overlap by 4 nucleotides Dsui_1641 and Dsui_1642 are separated by 58 nucleotides
Dsui_1637: Dsui_1637 - 2-nitropropane dioxygenase-like enzyme, at 1,720,399 to 1,721,562
_1637
Dsui_1638: Dsui_1638 - methyl-accepting chemotaxis protein, at 1,721,559 to 1,722,224
_1638
Dsui_1639: Dsui_1639 - putative flavoprotein, at 1,722,224 to 1,722,964
_1639
Dsui_1640: Dsui_1640 - hypothetical protein, at 1,723,089 to 1,723,541
_1640
Dsui_1641: Dsui_1641 - SirA-like protein, at 1,723,538 to 1,723,777
_1641
Dsui_1642: Dsui_1642 - hypothetical protein, at 1,723,836 to 1,725,134
_1642
Position (kb)
1722
1723 Strain fitness (log2 ratio)
-1
0
1 at 1721.566 kb on - strand at 1721.571 kb on - strand at 1721.588 kb on + strand at 1721.620 kb on + strand at 1721.681 kb on + strand, within Dsui_1638 at 1721.681 kb on + strand, within Dsui_1638 at 1721.689 kb on - strand, within Dsui_1638 at 1721.717 kb on + strand, within Dsui_1638 at 1721.773 kb on + strand, within Dsui_1638 at 1721.786 kb on + strand, within Dsui_1638 at 1721.824 kb on + strand, within Dsui_1638 at 1721.858 kb on - strand, within Dsui_1638 at 1721.907 kb on - strand, within Dsui_1638 at 1722.080 kb on - strand, within Dsui_1638 at 1722.178 kb on + strand at 1722.180 kb on + strand at 1722.362 kb on - strand, within Dsui_1639 at 1722.479 kb on + strand, within Dsui_1639 at 1722.511 kb on + strand, within Dsui_1639 at 1722.601 kb on - strand, within Dsui_1639 at 1722.615 kb on + strand, within Dsui_1639 at 1722.623 kb on - strand, within Dsui_1639 at 1722.743 kb on + strand, within Dsui_1639 at 1722.968 kb on - strand at 1722.995 kb on + strand at 1723.174 kb on - strand, within Dsui_1640 at 1723.274 kb on + strand, within Dsui_1640 at 1723.282 kb on - strand, within Dsui_1640 at 1723.307 kb on - strand, within Dsui_1640 at 1723.481 kb on - strand, within Dsui_1640 at 1723.505 kb on - strand at 1723.534 kb on + strand at 1723.620 kb on + strand, within Dsui_1641 at 1723.665 kb on + strand, within Dsui_1641 at 1723.687 kb on - strand, within Dsui_1641 at 1723.730 kb on + strand, within Dsui_1641 at 1723.736 kb on - strand, within Dsui_1641 at 1723.743 kb on - strand, within Dsui_1641 at 1723.771 kb on + strand at 1723.864 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction rich media with sodium chlorite 0.16 mM remove 1,721,566 - -0.7 1,721,571 - +0.6 1,721,588 + -0.2 1,721,620 + -0.2 1,721,681 + Dsui_1638 0.18 -0.1 1,721,681 + Dsui_1638 0.18 +0.1 1,721,689 - Dsui_1638 0.20 -0.3 1,721,717 + Dsui_1638 0.24 +0.2 1,721,773 + Dsui_1638 0.32 -0.2 1,721,786 + Dsui_1638 0.34 -0.1 1,721,824 + Dsui_1638 0.40 -0.2 1,721,858 - Dsui_1638 0.45 -0.6 1,721,907 - Dsui_1638 0.52 +0.1 1,722,080 - Dsui_1638 0.78 -0.7 1,722,178 + +0.4 1,722,180 + -0.5 1,722,362 - Dsui_1639 0.19 +0.3 1,722,479 + Dsui_1639 0.34 -0.2 1,722,511 + Dsui_1639 0.39 +0.3 1,722,601 - Dsui_1639 0.51 -0.5 1,722,615 + Dsui_1639 0.53 +0.7 1,722,623 - Dsui_1639 0.54 +0.1 1,722,743 + Dsui_1639 0.70 -0.3 1,722,968 - +0.2 1,722,995 + -0.1 1,723,174 - Dsui_1640 0.19 +0.3 1,723,274 + Dsui_1640 0.41 +0.2 1,723,282 - Dsui_1640 0.43 +1.4 1,723,307 - Dsui_1640 0.48 -0.7 1,723,481 - Dsui_1640 0.87 -0.7 1,723,505 - -1.3 1,723,534 + -0.1 1,723,620 + Dsui_1641 0.34 -0.3 1,723,665 + Dsui_1641 0.53 -0.7 1,723,687 - Dsui_1641 0.62 -0.7 1,723,730 + Dsui_1641 0.80 -0.2 1,723,736 - Dsui_1641 0.82 +0.1 1,723,743 - Dsui_1641 0.85 -0.9 1,723,771 + -0.4 1,723,864 - +0.5
Or see this region's nucleotide sequence