Experiment: rich media with sodium chlorite 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1512 and Dsui_1513 are separated by 163 nucleotides Dsui_1513 and Dsui_1514 overlap by 4 nucleotides Dsui_1514 and Dsui_1515 are separated by 15 nucleotides Dsui_1515 and Dsui_1516 are separated by 70 nucleotides Dsui_1516 and Dsui_1517 are separated by 19 nucleotides
Dsui_1512: Dsui_1512 - Na+/H+ antiporter NhaD-like permease, at 1,576,011 to 1,577,246
_1512
Dsui_1513: Dsui_1513 - hypothetical protein, at 1,577,410 to 1,577,547
_1513
Dsui_1514: Dsui_1514 - 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase, at 1,577,544 to 1,578,017
_1514
Dsui_1515: Dsui_1515 - poly(A) polymerase, at 1,578,033 to 1,579,418
_1515
Dsui_1516: Dsui_1516 - HAD-superfamily subfamily IB hydrolase, TIGR01490, at 1,579,489 to 1,580,151
_1516
Dsui_1517: Dsui_1517 - DnaA regulatory inactivator Hda, at 1,580,171 to 1,580,854
_1517
Position (kb)
1578
1579
1580 Strain fitness (log2 ratio)
-1
0
1
2 at 1577.034 kb on - strand, within Dsui_1512 at 1577.034 kb on - strand, within Dsui_1512 at 1577.056 kb on - strand, within Dsui_1512 at 1577.064 kb on - strand, within Dsui_1512 at 1577.074 kb on - strand, within Dsui_1512 at 1577.074 kb on - strand, within Dsui_1512 at 1577.074 kb on - strand, within Dsui_1512 at 1577.091 kb on + strand at 1577.135 kb on + strand at 1577.140 kb on + strand at 1577.150 kb on + strand at 1577.150 kb on + strand at 1577.150 kb on + strand at 1577.158 kb on - strand at 1577.158 kb on - strand at 1577.158 kb on - strand at 1577.158 kb on - strand at 1577.158 kb on - strand at 1577.158 kb on - strand at 1577.263 kb on + strand at 1577.263 kb on + strand at 1577.263 kb on + strand at 1577.270 kb on + strand at 1577.270 kb on + strand at 1577.271 kb on - strand at 1577.271 kb on - strand at 1577.278 kb on - strand at 1577.305 kb on - strand at 1577.305 kb on - strand at 1577.324 kb on + strand at 1577.340 kb on - strand at 1577.342 kb on + strand at 1577.406 kb on - strand at 1577.433 kb on + strand at 1577.455 kb on - strand, within Dsui_1513 at 1577.459 kb on + strand, within Dsui_1513 at 1577.465 kb on - strand, within Dsui_1513 at 1577.474 kb on - strand, within Dsui_1513 at 1577.492 kb on - strand, within Dsui_1513 at 1577.502 kb on + strand, within Dsui_1513 at 1577.534 kb on + strand at 1578.136 kb on + strand at 1578.268 kb on + strand, within Dsui_1515 at 1578.997 kb on - strand, within Dsui_1515 at 1579.071 kb on - strand, within Dsui_1515 at 1579.155 kb on - strand, within Dsui_1515 at 1579.170 kb on - strand, within Dsui_1515 at 1580.176 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction rich media with sodium chlorite 0.16 mM remove 1,577,034 - Dsui_1512 0.83 +0.4 1,577,034 - Dsui_1512 0.83 +0.2 1,577,056 - Dsui_1512 0.85 +0.1 1,577,064 - Dsui_1512 0.85 -0.3 1,577,074 - Dsui_1512 0.86 -0.8 1,577,074 - Dsui_1512 0.86 -0.5 1,577,074 - Dsui_1512 0.86 -0.2 1,577,091 + +0.6 1,577,135 + -0.5 1,577,140 + +1.2 1,577,150 + +0.1 1,577,150 + +0.6 1,577,150 + -0.5 1,577,158 - +0.6 1,577,158 - +0.1 1,577,158 - +1.6 1,577,158 - -0.4 1,577,158 - -1.0 1,577,158 - +0.3 1,577,263 + +0.2 1,577,263 + -0.3 1,577,263 + +0.3 1,577,270 + +0.6 1,577,270 + +0.4 1,577,271 - +0.1 1,577,271 - -0.3 1,577,278 - -0.4 1,577,305 - +0.0 1,577,305 - +0.5 1,577,324 + +0.5 1,577,340 - -0.2 1,577,342 + +0.5 1,577,406 - -0.4 1,577,433 + +2.0 1,577,455 - Dsui_1513 0.33 -0.1 1,577,459 + Dsui_1513 0.36 -1.1 1,577,465 - Dsui_1513 0.40 -0.2 1,577,474 - Dsui_1513 0.46 -0.1 1,577,492 - Dsui_1513 0.59 -0.0 1,577,502 + Dsui_1513 0.67 -1.2 1,577,534 + -1.1 1,578,136 + -0.2 1,578,268 + Dsui_1515 0.17 -0.5 1,578,997 - Dsui_1515 0.70 -1.2 1,579,071 - Dsui_1515 0.75 +0.7 1,579,155 - Dsui_1515 0.81 -1.0 1,579,170 - Dsui_1515 0.82 +0.1 1,580,176 - +0.0
Or see this region's nucleotide sequence