Strain Fitness in Shewanella oneidensis MR-1 around SO2022
Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Thallium(I) acetate 0.008 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 2,120,894 | - | -0.3 | |||
| 2,121,920 | + | SO2022 | 0.14 | -0.7 | |
| 2,121,920 | + | SO2022 | 0.14 | -0.0 | |
| 2,121,922 | - | SO2022 | 0.15 | -0.1 | |
| 2,121,948 | - | SO2022 | 0.20 | +0.2 | |
| 2,121,963 | - | SO2022 | 0.23 | +0.4 | |
| 2,122,043 | + | SO2022 | 0.38 | +0.1 | |
| 2,122,043 | + | SO2022 | 0.38 | +0.3 | |
| 2,122,067 | + | SO2022 | 0.42 | +0.3 | |
| 2,122,075 | + | SO2022 | 0.44 | +0.4 | |
| 2,122,311 | + | SO2022 | 0.89 | +0.5 | |
| 2,122,371 | - | +0.2 | |||
| 2,122,389 | - | -0.4 | |||
| 2,122,414 | - | +0.2 | |||
| 2,122,420 | - | +0.3 | |||
| 2,122,464 | - | -1.0 | |||
| 2,122,517 | + | +0.2 | |||
| 2,122,517 | + | +0.8 | |||
| 2,122,517 | + | +1.0 | |||
| 2,122,525 | - | +0.3 | |||
| 2,122,556 | - | +2.0 | |||
| 2,123,045 | + | SO2024 | 0.22 | +0.1 | |
| 2,123,100 | - | SO2024 | 0.26 | -0.2 | |
| 2,123,328 | + | SO2024 | 0.45 | -0.1 |
Or see this region's nucleotide sequence