Strain Fitness in Marinobacter adhaerens HP15 around HP15_71

Experiment: succinate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_71 and HP15_72 are separated by 126 nucleotides HP15_71: HP15_71 - hypothetical protein, at 79,518 to 79,655 _71 HP15_72: HP15_72 - conserved hypothetical protein, at 79,782 to 80,045 _72 Position (kb) 79 80Strain fitness (log2 ratio) -2 -1 0 1 2at 78.585 kb on + strandat 78.593 kb on - strandat 78.610 kb on - strandat 78.625 kb on - strandat 78.640 kb on + strandat 78.648 kb on - strandat 78.680 kb on - strandat 78.699 kb on + strandat 78.710 kb on + strandat 78.732 kb on - strandat 78.797 kb on - strandat 78.902 kb on + strandat 78.940 kb on - strandat 78.958 kb on - strandat 79.020 kb on - strandat 79.032 kb on + strandat 79.089 kb on + strandat 79.101 kb on + strandat 79.157 kb on + strandat 79.239 kb on + strandat 79.247 kb on - strandat 79.256 kb on - strandat 79.274 kb on + strandat 79.274 kb on + strandat 79.277 kb on - strandat 79.329 kb on - strandat 79.354 kb on - strandat 79.381 kb on + strandat 79.381 kb on + strandat 79.381 kb on + strandat 79.381 kb on + strandat 79.389 kb on - strandat 79.421 kb on - strandat 79.421 kb on - strandat 79.498 kb on + strandat 79.506 kb on - strandat 79.516 kb on - strandat 79.525 kb on + strandat 79.528 kb on - strandat 79.582 kb on + strand, within HP15_71at 79.607 kb on + strand, within HP15_71at 79.638 kb on + strand, within HP15_71at 79.671 kb on - strandat 79.801 kb on - strandat 79.819 kb on + strand, within HP15_72at 79.820 kb on + strand, within HP15_72at 79.827 kb on - strand, within HP15_72at 79.838 kb on + strand, within HP15_72at 79.843 kb on + strand, within HP15_72at 79.877 kb on - strand, within HP15_72at 79.877 kb on - strand, within HP15_72at 79.877 kb on - strand, within HP15_72at 79.954 kb on - strand, within HP15_72at 80.050 kb on + strandat 80.050 kb on + strandat 80.050 kb on + strandat 80.053 kb on + strandat 80.053 kb on + strandat 80.110 kb on + strandat 80.111 kb on + strandat 80.130 kb on + strandat 80.138 kb on - strandat 80.267 kb on + strandat 80.309 kb on + strandat 80.347 kb on + strandat 80.419 kb on + strandat 80.419 kb on + strandat 80.427 kb on - strandat 80.444 kb on + strandat 80.444 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction succinate
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78,585 + +1.3
78,593 - +1.4
78,610 - -0.2
78,625 - -0.5
78,640 + -0.4
78,648 - +0.1
78,680 - +0.1
78,699 + +1.2
78,710 + +0.1
78,732 - -0.0
78,797 - +1.2
78,902 + +0.7
78,940 - -0.1
78,958 - -1.9
79,020 - +1.5
79,032 + -0.4
79,089 + -0.1
79,101 + -0.7
79,157 + -0.3
79,239 + +1.5
79,247 - -0.1
79,256 - -0.7
79,274 + +0.2
79,274 + -1.2
79,277 - -0.4
79,329 - +0.5
79,354 - -0.3
79,381 + -0.8
79,381 + -0.4
79,381 + +1.5
79,381 + -2.7
79,389 - -0.2
79,421 - +0.3
79,421 - +1.1
79,498 + +0.5
79,506 - -0.3
79,516 - -0.4
79,525 + +1.3
79,528 - -0.1
79,582 + HP15_71 0.46 +1.6
79,607 + HP15_71 0.64 -0.2
79,638 + HP15_71 0.87 +1.4
79,671 - +1.6
79,801 - +0.6
79,819 + HP15_72 0.14 -0.5
79,820 + HP15_72 0.14 -1.1
79,827 - HP15_72 0.17 +0.2
79,838 + HP15_72 0.21 -0.2
79,843 + HP15_72 0.23 +1.6
79,877 - HP15_72 0.36 +0.6
79,877 - HP15_72 0.36 +1.6
79,877 - HP15_72 0.36 -0.1
79,954 - HP15_72 0.65 +1.6
80,050 + +0.2
80,050 + +1.3
80,050 + -0.4
80,053 + -0.0
80,053 + -0.3
80,110 + -0.2
80,111 + -0.6
80,130 + +1.7
80,138 - +1.6
80,267 + -2.2
80,309 + +1.4
80,347 + -0.1
80,419 + -0.5
80,419 + -0.4
80,427 - -0.6
80,444 + +1.9
80,444 + +0.5

Or see this region's nucleotide sequence