Strain Fitness in Dechlorosoma suillum PS around Dsui_1652

Experiment: rich media with sodium chlorite 0.16 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_1650 and Dsui_1651 are separated by 153 nucleotidesDsui_1651 and Dsui_1652 are separated by 77 nucleotidesDsui_1652 and Dsui_1653 overlap by 4 nucleotides Dsui_1650: Dsui_1650 - copper/silver-translocating P-type ATPase, at 1,731,202 to 1,733,637 _1650 Dsui_1651: Dsui_1651 - copper chaperone, at 1,733,791 to 1,733,997 _1651 Dsui_1652: Dsui_1652 - FeoA-like protein, at 1,734,075 to 1,734,326 _1652 Dsui_1653: Dsui_1653 - ferrous iron transporter FeoB, at 1,734,323 to 1,736,323 _1653 Position (kb) 1734 1735Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1at 1733.097 kb on + strand, within Dsui_1650at 1733.261 kb on - strandat 1733.424 kb on + strandat 1733.431 kb on + strandat 1733.432 kb on - strandat 1733.439 kb on - strandat 1733.479 kb on + strandat 1733.522 kb on - strandat 1733.557 kb on - strandat 1733.557 kb on - strandat 1733.663 kb on + strandat 1733.844 kb on + strand, within Dsui_1651at 1733.944 kb on + strand, within Dsui_1651at 1734.006 kb on + strandat 1734.138 kb on - strand, within Dsui_1652at 1734.211 kb on + strand, within Dsui_1652at 1734.411 kb on + strandat 1734.529 kb on + strand, within Dsui_1653at 1734.537 kb on - strand, within Dsui_1653at 1734.768 kb on - strand, within Dsui_1653at 1734.773 kb on - strand, within Dsui_1653at 1734.828 kb on - strand, within Dsui_1653at 1734.828 kb on - strand, within Dsui_1653at 1734.835 kb on + strandat 1734.875 kb on + strand, within Dsui_1653at 1734.883 kb on - strand, within Dsui_1653at 1734.941 kb on + strand, within Dsui_1653at 1735.031 kb on + strand, within Dsui_1653at 1735.031 kb on + strand, within Dsui_1653at 1735.037 kb on + strandat 1735.218 kb on - strand, within Dsui_1653

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Per-strain Table

Position Strand Gene LocusTag Fraction rich media with sodium chlorite 0.16 mM
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1,733,097 + Dsui_1650 0.78 -0.9
1,733,261 - -1.0
1,733,424 + -0.3
1,733,431 + +0.5
1,733,432 - -1.3
1,733,439 - +0.6
1,733,479 + +0.2
1,733,522 - +1.3
1,733,557 - -1.1
1,733,557 - -2.0
1,733,663 + +0.5
1,733,844 + Dsui_1651 0.26 -0.2
1,733,944 + Dsui_1651 0.74 +0.1
1,734,006 + +0.6
1,734,138 - Dsui_1652 0.25 -3.2
1,734,211 + Dsui_1652 0.54 -1.4
1,734,411 + -1.5
1,734,529 + Dsui_1653 0.10 -0.7
1,734,537 - Dsui_1653 0.11 -2.9
1,734,768 - Dsui_1653 0.22 -1.4
1,734,773 - Dsui_1653 0.22 -3.6
1,734,828 - Dsui_1653 0.25 -5.0
1,734,828 - Dsui_1653 0.25 -2.2
1,734,835 + -1.2
1,734,875 + Dsui_1653 0.28 -1.8
1,734,883 - Dsui_1653 0.28 -2.2
1,734,941 + Dsui_1653 0.31 -2.2
1,735,031 + Dsui_1653 0.35 -1.8
1,735,031 + Dsui_1653 0.35 -2.7
1,735,037 + -0.2
1,735,218 - Dsui_1653 0.45 -3.9

Or see this region's nucleotide sequence