Strain Fitness in Shewanella amazonensis SB2B around Sama_1873

Experiment: pyruvate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pyruvate
2,285,766	+		Sama_1872	0.68	+1.1
2,285,766	+		Sama_1872	0.68	-0.8
2,285,766	+		Sama_1872	0.68	-0.4
2,285,766	+		Sama_1872	0.68	+0.6
2,285,766	+		Sama_1872	0.68	-2.0
2,285,766	+		Sama_1872	0.68	-1.3
2,285,766	+		Sama_1872	0.68	-0.9
2,285,767	-		Sama_1872	0.68	-0.3
2,285,767	-		Sama_1872	0.68	-0.0
2,285,767	-		Sama_1872	0.68	+1.3
2,285,767	-		Sama_1872	0.68	-0.9
2,285,767	-		Sama_1872	0.68	+0.8
2,285,767	-		Sama_1872	0.68	+0.4
2,285,767	-		Sama_1872	0.68	+0.2
2,285,767	-		Sama_1872	0.68	+0.3
2,285,767	-		Sama_1872	0.68	-1.9
2,285,770	+		Sama_1872	0.68	-0.1
2,285,770	+		Sama_1872	0.68	-0.0
2,285,771	-		Sama_1872	0.68	-0.0
2,285,771	-		Sama_1872	0.68	+0.6
2,285,771	-		Sama_1872	0.68	-2.7
2,285,771	-		Sama_1872	0.68	-0.1
2,285,771	-		Sama_1872	0.68	+1.4
2,285,771	-		Sama_1872	0.68	+0.8
2,285,837	-		Sama_1872	0.70	-0.1
2,285,839	-		Sama_1872	0.70	+0.9
2,285,855	+		Sama_1872	0.71	-0.6
2,285,855	+		Sama_1872	0.71	-1.1
2,285,855	+		Sama_1872	0.71	+1.9
2,285,885	+		Sama_1872	0.72	-0.6
2,285,950	-		Sama_1872	0.74	-1.0
2,285,956	+		Sama_1872	0.74	-0.1
2,285,956	+		Sama_1872	0.74	-0.6
2,285,956	+		Sama_1872	0.74	+1.0
2,285,956	+		Sama_1872	0.74	+1.0
2,285,957	-		Sama_1872	0.74	+0.7
2,285,957	-		Sama_1872	0.74	+1.1
2,285,957	-		Sama_1872	0.74	-0.6
2,285,957	-		Sama_1872	0.74	+1.0
2,285,970	-		Sama_1872	0.74	+0.4
2,285,987	+		Sama_1872	0.75	+0.7
2,286,034	+		Sama_1872	0.76	+0.9
2,286,034	+		Sama_1872	0.76	-0.4
2,286,034	+		Sama_1872	0.76	+0.6
2,286,034	+		Sama_1872	0.76	-1.1
2,286,034	+		Sama_1872	0.76	+1.6
2,286,035	-		Sama_1872	0.76	+0.1
2,286,035	-		Sama_1872	0.76	+0.4
2,286,135	+		Sama_1872	0.80	+2.2
2,286,158	-		Sama_1872	0.80	-0.1
2,286,177	+		Sama_1872	0.81	-0.1
2,286,236	+		Sama_1872	0.83	-0.3
2,286,236	+		Sama_1872	0.83	+1.2
2,286,236	+		Sama_1872	0.83	+0.3
2,286,237	-		Sama_1872	0.83	+0.4
2,286,284	+		Sama_1872	0.84	+0.3
2,286,285	-		Sama_1872	0.84	-0.5
2,286,285	-		Sama_1872	0.84	-0.1
2,286,288	+		Sama_1872	0.84	+0.0
2,286,288	+		Sama_1872	0.84	-1.1
2,286,288	+		Sama_1872	0.84	-0.0
2,286,288	+		Sama_1872	0.84	-0.0
2,286,289	-		Sama_1872	0.85	+0.8
2,286,289	-		Sama_1872	0.85	+0.3
2,286,294	+		Sama_1872	0.85	+1.4
2,286,294	+		Sama_1872	0.85	-0.2
2,286,294	+		Sama_1872	0.85	-0.3
2,286,294	+		Sama_1872	0.85	-0.6
2,286,295	-		Sama_1872	0.85	+0.7
2,286,295	-		Sama_1872	0.85	+0.7
2,286,297	+		Sama_1872	0.85	-1.7
2,286,297	+		Sama_1872	0.85	+1.0
2,286,298	-		Sama_1872	0.85	+0.4
2,286,318	+		Sama_1872	0.85	+0.8
2,286,327	-		Sama_1872	0.86	-2.9
2,286,347	+		Sama_1872	0.86	+1.4
2,286,406	-		Sama_1872	0.88	-3.1
2,286,436	-		Sama_1872	0.89	+0.9
2,286,456	+		Sama_1872	0.90	+0.3
2,286,456	+		Sama_1872	0.90	-1.4
2,286,456	+		Sama_1872	0.90	-0.6
2,286,456	+		Sama_1872	0.90	-1.1
2,286,457	-		Sama_1872	0.90	+0.8
2,286,457	-		Sama_1872	0.90	+0.1
2,286,457	-		Sama_1872	0.90	+0.3
2,286,457	-		Sama_1872	0.90	+0.5
2,286,457	-		Sama_1872	0.90	-0.8
2,286,457	-		Sama_1872	0.90	+0.8
2,286,457	-		Sama_1872	0.90	+1.9
2,286,458	+		Sama_1872	0.90	+0.5
2,286,458	+		Sama_1872	0.90	-0.4
2,286,458	+		Sama_1872	0.90	+0.1
2,286,458	+		Sama_1872	0.90	+2.4
2,286,459	-		Sama_1872	0.90	-0.6
2,286,459	-		Sama_1872	0.90	+0.9
2,286,459	-		Sama_1872	0.90	-0.5
2,286,486	+				+0.4
2,286,486	+				-0.1
2,286,486	+				+0.7
2,286,487	-				-0.1
2,286,487	-				-0.3
2,286,487	-				+1.2
2,286,492	-				+1.3
2,286,558	-				-0.7
2,286,566	-				-0.0
2,286,668	+				+0.6
2,286,689	+				-0.8
2,286,715	-				-0.2
2,286,773	-				+0.3
2,286,778	+				+0.4
2,286,779	-				+0.9
2,286,779	-				-0.6
2,286,792	+				-0.6
2,286,793	-				-0.9
2,286,793	-				-0.7
2,286,822	+				-1.1
2,286,831	+		Sama_1873	0.10	+0.7
2,286,831	+		Sama_1873	0.10	-0.6
2,286,831	+		Sama_1873	0.10	-0.9
2,286,831	+		Sama_1873	0.10	+0.3
2,286,832	-		Sama_1873	0.10	+0.0
2,286,832	-		Sama_1873	0.10	+0.4
2,286,834	+		Sama_1873	0.11	-0.6
2,286,834	+		Sama_1873	0.11	-0.2
2,286,834	+		Sama_1873	0.11	-0.1
2,286,834	+		Sama_1873	0.11	-1.3
2,286,834	+		Sama_1873	0.11	+0.7
2,286,834	+		Sama_1873	0.11	-0.1
2,286,834	+		Sama_1873	0.11	+0.0
2,286,835	-		Sama_1873	0.11	-0.3
2,286,835	-		Sama_1873	0.11	-0.8
2,286,835	-		Sama_1873	0.11	+0.4
2,286,835	-		Sama_1873	0.11	-0.5
2,286,835	-		Sama_1873	0.11	-0.8
2,286,835	-		Sama_1873	0.11	-0.7
2,286,835	-		Sama_1873	0.11	-0.8
2,286,835	-		Sama_1873	0.11	+0.0
2,286,835	-		Sama_1873	0.11	+0.7
2,286,838	+		Sama_1873	0.11	+1.2
2,286,901	-		Sama_1873	0.21	+0.1
2,286,911	-		Sama_1873	0.23	-2.1
2,286,911	-		Sama_1873	0.23	-0.2
2,286,951	+		Sama_1873	0.29	-0.6
2,287,027	+		Sama_1873	0.41	+1.6
2,287,037	+		Sama_1873	0.42	-0.1
2,287,054	-		Sama_1873	0.45	-2.1
2,287,073	+		Sama_1873	0.48	-0.8
2,287,074	-		Sama_1873	0.48	-0.4
2,287,081	-		Sama_1873	0.49	-0.5
2,287,115	-		Sama_1873	0.54	+0.1
2,287,142	+		Sama_1873	0.58	+1.4
2,287,163	-		Sama_1873	0.62	+0.4
2,287,182	+		Sama_1873	0.65	+0.3
2,287,183	-		Sama_1873	0.65	-0.0
2,287,183	-		Sama_1873	0.65	-0.9
2,287,190	-		Sama_1873	0.66	+0.5
2,287,225	-		Sama_1873	0.71	-0.1
2,287,257	+		Sama_1873	0.76	-0.6
2,287,294	+		Sama_1873	0.82	-1.0
2,287,339	-		Sama_1873	0.89	+0.1
2,287,339	-		Sama_1873	0.89	+0.6
2,287,351	-				-0.6
2,287,426	+				-0.1
2,287,426	+				+0.4
2,287,446	-				+0.7
2,287,453	+				-0.2
2,287,542	+				+1.0
2,287,549	+				+0.2
2,287,550	-				+1.1
2,287,794	-				-0.3
2,287,825	+				-0.6
2,287,836	-				+0.8
2,287,857	-				-0.1
2,287,857	-				-1.6
2,287,857	-				+1.4
2,287,929	+				+0.2
2,287,929	+				-1.4
2,287,930	-				+0.2
2,287,930	-				+0.0
2,287,931	+				-1.7
2,287,931	+				+1.0
2,287,931	+				+0.7
2,287,932	-				+1.1
2,287,968	+				-0.1
2,287,968	+				-0.8
2,287,968	+				-0.1
2,287,969	-				+0.7
2,287,969	-				+1.2
2,287,969	-				-0.2
2,287,969	-				+0.4
2,288,005	+				+0.1
2,288,006	-				-1.6
2,288,010	+				+0.1
2,288,117	+		Sama_1874	0.16	-0.7
2,288,118	-		Sama_1874	0.16	-0.6
2,288,118	-		Sama_1874	0.16	-0.9
2,288,118	-		Sama_1874	0.16	+0.4
2,288,194	-		Sama_1874	0.29	-1.4
2,288,256	+		Sama_1874	0.39	-1.1
2,288,371	+		Sama_1874	0.57	+0.4
2,288,371	+		Sama_1874	0.57	+1.3
2,288,371	+		Sama_1874	0.57	+0.1
2,288,372	-		Sama_1874	0.57	+0.1
2,288,409	-		Sama_1874	0.63	+0.3