Strain Fitness in Shewanella amazonensis SB2B around Sama_1260

Experiment: pyruvate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pyruvate
1,546,703	+		Sama_1259	0.24	-3.7
1,546,823	+		Sama_1259	0.34	-1.9
1,546,825	+		Sama_1259	0.34	-1.9
1,546,825	+		Sama_1259	0.34	-4.0
1,546,917	+		Sama_1259	0.41	-2.2
1,547,012	+		Sama_1259	0.49	-3.6
1,547,031	+		Sama_1259	0.50	-0.3
1,547,031	+		Sama_1259	0.50	-1.9
1,547,135	+		Sama_1259	0.59	-2.9
1,547,192	+		Sama_1259	0.63	-2.2
1,547,349	-		Sama_1259	0.76	-0.3
1,547,351	+		Sama_1259	0.76	-3.2
1,547,535	-				+0.6
1,547,536	+				-1.7
1,547,536	+				-1.7
1,547,536	+				-1.2
1,547,537	-				-1.4
1,547,537	-				-2.7
1,547,557	+				-1.4
1,547,603	+				-1.4
1,547,603	+				-1.4
1,547,603	+				-1.4
1,547,604	-				-2.6
1,547,651	+				+0.3
1,547,651	+				-0.9
1,547,658	+				-0.5
1,547,658	+				-0.1
1,547,658	+				-2.0
1,547,658	+				-1.8
1,547,658	+				-2.2
1,547,658	+				-1.2
1,547,658	+				-1.5
1,547,660	+				-2.5
1,547,660	+				-2.4
1,547,660	+				-1.4
1,547,660	+				-0.4
1,547,661	-				-1.9
1,547,682	+				-1.4
1,547,682	+				-0.6
1,547,770	+		Sama_1260	0.15	+0.6
1,547,771	-		Sama_1260	0.15	-0.4
1,547,771	-		Sama_1260	0.15	+0.2
1,547,771	-		Sama_1260	0.15	+0.2
1,547,775	-		Sama_1260	0.15	+0.9
1,547,866	+		Sama_1260	0.33	-0.9
1,547,866	+		Sama_1260	0.33	+0.5
1,547,867	-		Sama_1260	0.34	+2.3
1,547,867	-		Sama_1260	0.34	+0.4
1,547,870	-		Sama_1260	0.34	+0.3
1,547,907	-		Sama_1260	0.41	-0.2
1,547,921	+		Sama_1260	0.44	+0.6
1,547,921	+		Sama_1260	0.44	+0.3
1,547,922	-		Sama_1260	0.44	-0.6
1,547,922	-		Sama_1260	0.44	+0.5
1,547,922	-		Sama_1260	0.44	+0.3
1,547,922	-		Sama_1260	0.44	-0.3
1,547,922	-		Sama_1260	0.44	+1.1
1,547,922	-		Sama_1260	0.44	-0.0
1,547,960	-		Sama_1260	0.52	-0.0
1,547,975	+		Sama_1260	0.55	+0.1
1,547,975	+		Sama_1260	0.55	-0.9
1,547,976	-		Sama_1260	0.55	+0.1
1,548,068	+		Sama_1260	0.73	-1.3
1,548,068	+		Sama_1260	0.73	-1.9
1,548,068	+		Sama_1260	0.73	+0.3
1,548,069	-		Sama_1260	0.73	-0.3
1,548,069	-		Sama_1260	0.73	-0.7
1,548,072	+		Sama_1260	0.74	+1.6
1,548,072	+		Sama_1260	0.74	-0.2
1,548,072	+		Sama_1260	0.74	+0.5
1,548,072	+		Sama_1260	0.74	-0.6
1,548,072	+		Sama_1260	0.74	+0.2
1,548,072	+		Sama_1260	0.74	+0.6
1,548,072	+		Sama_1260	0.74	-0.7
1,548,072	+		Sama_1260	0.74	-1.9
1,548,072	+		Sama_1260	0.74	+0.3
1,548,072	+		Sama_1260	0.74	-3.2
1,548,072	+		Sama_1260	0.74	-1.4
1,548,073	-		Sama_1260	0.74	-0.9
1,548,073	-		Sama_1260	0.74	+0.9
1,548,073	-		Sama_1260	0.74	+0.6
1,548,104	-		Sama_1260	0.80	+0.3
1,548,104	-		Sama_1260	0.80	+0.7
1,548,104	-		Sama_1260	0.80	-0.9
1,548,142	-		Sama_1260	0.87	-1.5
1,548,198	+				-0.0
1,548,223	+				-0.1
1,548,229	-				+1.0
1,548,229	-				-0.4
1,548,232	+				+0.9
1,548,233	-				-0.3
1,548,238	+				+0.9
1,548,239	-				-0.0
1,548,239	-				+0.2
1,548,241	-				+0.8
1,548,243	-				+0.7
1,548,258	-				+1.1
1,548,284	-				+0.1
1,548,309	+				+0.1
1,548,310	-				-0.7
1,548,435	+				-0.6
1,548,444	+				+0.3
1,548,444	+				-0.3
1,548,445	-				+0.6
1,548,445	-				-1.4
1,548,452	+				+0.1
1,548,453	-				+2.2
1,548,453	-				-0.5
1,548,458	-				-0.9
1,548,485	+		Sama_1261	0.11	-0.3
1,548,512	+		Sama_1261	0.12	-0.6
1,548,512	+		Sama_1261	0.12	-1.4
1,548,548	+		Sama_1261	0.14	-1.6
1,548,548	+		Sama_1261	0.14	+0.1
1,548,569	+		Sama_1261	0.16	+1.0
1,548,570	-		Sama_1261	0.16	+1.6
1,548,571	+		Sama_1261	0.16	-0.5
1,548,571	+		Sama_1261	0.16	+0.5
1,548,571	+		Sama_1261	0.16	-0.5
1,548,572	-		Sama_1261	0.16	+0.9
1,548,572	-		Sama_1261	0.16	+2.0
1,548,572	-		Sama_1261	0.16	+1.1
1,548,572	-		Sama_1261	0.16	+0.4
1,548,574	+		Sama_1261	0.16	-0.4
1,548,575	-		Sama_1261	0.16	-0.9
1,548,581	+		Sama_1261	0.16	-2.5
1,548,582	-		Sama_1261	0.16	+2.0
1,548,603	+		Sama_1261	0.17	+1.3
1,548,603	+		Sama_1261	0.17	+0.2
1,548,603	+		Sama_1261	0.17	-2.8
1,548,603	+		Sama_1261	0.17	+0.1
1,548,603	+		Sama_1261	0.17	+0.3
1,548,604	-		Sama_1261	0.17	+1.0
1,548,604	-		Sama_1261	0.17	-0.2
1,548,604	-		Sama_1261	0.17	+0.4
1,548,604	-		Sama_1261	0.17	-1.9
1,548,607	+		Sama_1261	0.18	-0.4
1,548,607	+		Sama_1261	0.18	-0.1
1,548,607	+		Sama_1261	0.18	-2.4
1,548,607	+		Sama_1261	0.18	+1.2
1,548,607	+		Sama_1261	0.18	+0.3
1,548,607	+		Sama_1261	0.18	-0.5
1,548,607	+		Sama_1261	0.18	-0.7
1,548,608	-		Sama_1261	0.18	-0.2
1,548,608	-		Sama_1261	0.18	+0.6
1,548,648	+		Sama_1261	0.20	-0.0
1,548,648	+		Sama_1261	0.20	+0.6
1,548,649	-		Sama_1261	0.20	-1.1
1,548,656	+		Sama_1261	0.20	-0.5
1,548,723	-		Sama_1261	0.24	+0.5
1,548,727	+		Sama_1261	0.24	-0.1
1,548,727	+		Sama_1261	0.24	-1.1
1,548,728	-		Sama_1261	0.24	+0.6
1,548,733	+		Sama_1261	0.25	-0.8
1,548,733	+		Sama_1261	0.25	-0.4
1,548,733	+		Sama_1261	0.25	-0.2
1,548,733	+		Sama_1261	0.25	+0.6
1,548,734	-		Sama_1261	0.25	-0.7
1,548,734	-		Sama_1261	0.25	+0.4
1,548,795	-		Sama_1261	0.28	+0.5
1,548,817	-		Sama_1261	0.29	-0.7
1,548,817	-		Sama_1261	0.29	+3.0
1,548,817	-		Sama_1261	0.29	+0.5
1,548,817	-		Sama_1261	0.29	-0.5
1,548,817	-		Sama_1261	0.29	+0.6
1,548,882	+		Sama_1261	0.33	+0.3
1,548,883	-		Sama_1261	0.33	+0.1
1,548,883	-		Sama_1261	0.33	+0.9
1,548,883	-		Sama_1261	0.33	-0.8
1,548,897	+		Sama_1261	0.33	+0.6
1,548,903	+		Sama_1261	0.34	+1.5
1,548,904	-		Sama_1261	0.34	+0.8
1,548,904	-		Sama_1261	0.34	-0.9
1,548,959	-		Sama_1261	0.37	-0.2
1,549,009	+		Sama_1261	0.40	-0.1
1,549,010	-		Sama_1261	0.40	-0.2
1,549,100	+		Sama_1261	0.45	-1.6
1,549,100	+		Sama_1261	0.45	+0.2
1,549,100	+		Sama_1261	0.45	-0.5
1,549,100	+		Sama_1261	0.45	-0.6
1,549,101	-		Sama_1261	0.45	-0.4
1,549,101	-		Sama_1261	0.45	+0.6
1,549,150	+		Sama_1261	0.47	-0.2
1,549,160	+		Sama_1261	0.48	+1.2
1,549,160	+		Sama_1261	0.48	-1.4