Strain Fitness in Shewanella oneidensis MR-1 around SO4727

Experiment: Paraquat dichloride 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.5 mg/ml
4,931,107	+	mutM	SO4726	0.87	+0.8
4,931,129	+	mutM	SO4726	0.89	-1.4
4,931,129	+	mutM	SO4726	0.89	-0.6
4,931,129	+	mutM	SO4726	0.89	-0.5
4,931,137	-				-1.1
4,931,137	-				+1.6
4,931,137	-				+1.7
4,931,137	-				+0.6
4,931,137	-				+0.1
4,931,137	-				-0.3
4,931,183	-				-0.9
4,931,209	+				-0.1
4,931,229	+				+0.3
4,931,356	+				+0.8
4,931,356	+				+2.2
4,931,364	-				+1.9
4,931,374	-				+1.7
4,931,507	-				+1.8
4,931,782	+				+1.4
4,931,880	+				+1.7
4,931,995	+				+0.4
4,932,003	-				-0.1
4,932,039	+				+0.9
4,932,154	-		SO4727	0.14	+0.1
4,932,159	-		SO4727	0.15	+1.2
4,932,227	+		SO4727	0.26	+0.9
4,932,315	-		SO4727	0.39	+0.4
4,932,331	+		SO4727	0.42	+0.8
4,932,379	-		SO4727	0.49	+1.3
4,932,389	-		SO4727	0.51	+0.9
4,932,512	-		SO4727	0.70	+1.0
4,932,530	-		SO4727	0.73	+0.0
4,932,567	-		SO4727	0.79	+0.5
4,932,828	-				+2.4
4,932,833	-				+2.4
4,932,876	-		SO4728	0.16	+1.4
4,932,928	+		SO4728	0.26	+2.3
4,932,931	-		SO4728	0.26	+2.2
4,933,001	+		SO4728	0.39	+2.9
4,933,252	+		SO4728	0.85	+1.8
4,933,309	+				+0.3
4,933,484	-		SO4729	0.17	-0.0
4,933,484	-		SO4729	0.17	-0.0
4,933,634	-		SO4729	0.49	+0.3
4,933,683	-		SO4729	0.59	+0.2