Strain Fitness in Shewanella oneidensis MR-1 around SO4719

Experiment: Paraquat dichloride 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.5 mg/ml
4,923,306	-		SO4718	0.56	-1.3
4,923,349	-		SO4718	0.60	+0.9
4,923,376	-		SO4718	0.62	+1.1
4,923,474	+		SO4718	0.69	+0.6
4,923,484	+		SO4718	0.69	-1.3
4,923,492	-		SO4718	0.70	+0.8
4,923,492	-		SO4718	0.70	+0.1
4,923,517	+		SO4718	0.72	+1.7
4,923,522	-		SO4718	0.72	+0.7
4,923,522	-		SO4718	0.72	-3.5
4,923,555	-		SO4718	0.74	+0.0
4,923,672	+		SO4718	0.83	-0.4
4,923,691	-		SO4718	0.84	+0.2
4,923,691	-		SO4718	0.84	+0.2
4,923,695	-		SO4718	0.85	+0.8
4,923,762	-		SO4718	0.89	-0.7
4,923,771	-				+1.0
4,923,771	-				-0.3
4,923,780	+				+0.5
4,923,901	+				+0.7
4,923,901	+				-0.3
4,923,901	+				+0.2
4,923,924	-				+1.0
4,924,032	+				-0.3
4,924,143	-				-1.3
4,924,437	+		SO4719	0.30	-2.6
4,924,444	+		SO4719	0.31	-0.1
4,924,489	+		SO4719	0.36	+0.0
4,924,489	+		SO4719	0.36	-0.3
4,924,490	-		SO4719	0.36	-0.6
4,924,638	-		SO4719	0.54	+0.1
4,924,694	+		SO4719	0.61	-0.3
4,924,694	+		SO4719	0.61	-0.1
4,924,702	-		SO4719	0.62	+0.5
4,924,714	-		SO4719	0.63	-0.5
4,924,716	+		SO4719	0.64	-0.5
4,924,762	+		SO4719	0.69	-1.1
4,924,762	+		SO4719	0.69	-0.1
4,924,768	-		SO4719	0.70	-0.6
4,924,770	-		SO4719	0.70	-0.6
4,924,770	-		SO4719	0.70	-1.1
4,924,770	-		SO4719	0.70	-1.1
4,924,774	-		SO4719	0.71	+0.3
4,924,853	+		SO4719	0.80	-0.3
4,924,901	+		SO4719	0.86	-0.7
4,924,942	-				-0.3
4,924,966	+				-0.8
4,924,991	+				-3.9
4,924,991	+				-0.5
4,924,991	+				-2.0
4,924,999	-				-0.3
4,925,033	-				+0.1
4,925,033	-				-0.0
4,925,121	-		SO4720	0.15	-0.5
4,925,133	+		SO4720	0.17	-0.9
4,925,133	-		SO4720	0.17	-0.1
4,925,141	-		SO4720	0.18	-1.1
4,925,141	-		SO4720	0.18	+0.3
4,925,150	+		SO4720	0.19	+0.8
4,925,158	-		SO4720	0.21	-2.6
4,925,245	-		SO4720	0.33	+0.8
4,925,327	-		SO4720	0.44	-0.7
4,925,386	-		SO4720	0.53	+0.0
4,925,386	-		SO4720	0.53	+0.1
4,925,386	-		SO4720	0.53	-0.2
4,925,421	+		SO4720	0.58	-1.6
4,925,421	+		SO4720	0.58	-0.8
4,925,421	+		SO4720	0.58	-0.2
4,925,427	-		SO4720	0.59	-2.5
4,925,429	-		SO4720	0.59	+0.1
4,925,429	-		SO4720	0.59	-0.6
4,925,468	-		SO4720	0.64	-1.5
4,925,530	-		SO4720	0.73	-0.2
4,925,556	+		SO4720	0.77	-1.9
4,925,637	+		SO4720	0.88	-0.6
4,925,645	-		SO4720	0.89	-0.1
4,925,645	-		SO4720	0.89	+0.4
4,925,671	-				+0.7
4,925,720	+				+0.3
4,925,789	+				-0.4
4,925,797	-		SO4721	0.10	+0.1
4,925,797	-		SO4721	0.10	+0.1
4,925,834	+		SO4721	0.16	-0.4
4,925,842	+		SO4721	0.17	-0.1
4,925,861	-		SO4721	0.19	+0.0
4,925,861	-		SO4721	0.19	+0.3
4,925,907	-		SO4721	0.26	+0.3